668 related articles for article (PubMed ID: 27580035)
21. A neural network-based model framework for cell-fate decisions and development.
Paczkó M; Vörös D; Szabó P; Jékely G; Szathmáry E; Szilágyi A
Commun Biol; 2024 Mar; 7(1):323. PubMed ID: 38486083
[TBL] [Abstract][Full Text] [Related]
22. Shaping development by stochasticity and dynamics in gene regulation.
Dong P; Liu Z
Open Biol; 2017 May; 7(5):. PubMed ID: 28469006
[TBL] [Abstract][Full Text] [Related]
23. Direct lineage reprogramming via pioneer factors; a detour through developmental gene regulatory networks.
Morris SA
Development; 2016 Aug; 143(15):2696-705. PubMed ID: 27486230
[TBL] [Abstract][Full Text] [Related]
24. Decoding the principle of cell-fate determination for its reverse control.
Lee J; Kim N; Cho KH
NPJ Syst Biol Appl; 2024 May; 10(1):47. PubMed ID: 38710700
[TBL] [Abstract][Full Text] [Related]
25. Reconstructing developmental trajectories using latent dynamical systems and time-resolved transcriptomics.
Maizels RJ; Snell DM; Briscoe J
Cell Syst; 2024 May; 15(5):411-424.e9. PubMed ID: 38754365
[TBL] [Abstract][Full Text] [Related]
26. Discovering sparse transcription factor codes for cell states and state transitions during development.
Furchtgott LA; Melton S; Menon V; Ramanathan S
Elife; 2017 Mar; 6():. PubMed ID: 28296636
[TBL] [Abstract][Full Text] [Related]
27. A logic-incorporated gene regulatory network deciphers principles in cell fate decisions.
Xue G; Zhang X; Li W; Zhang L; Zhang Z; Zhou X; Zhang D; Zhang L; Li Z
Elife; 2024 Apr; 12():. PubMed ID: 38652107
[TBL] [Abstract][Full Text] [Related]
28. Integrated single-cell transcriptomic and epigenetic study of cell state transition and lineage commitment in embryonic mouse cerebellum.
Khouri-Farah N; Guo Q; Morgan K; Shin J; Li JYH
Sci Adv; 2022 Apr; 8(13):eabl9156. PubMed ID: 35363520
[TBL] [Abstract][Full Text] [Related]
29. Causal gene regulatory analysis with RNA velocity reveals an interplay between slow and fast transcription factors.
Singh R; Wu AP; Mudide A; Berger B
Cell Syst; 2024 May; 15(5):462-474.e5. PubMed ID: 38754366
[TBL] [Abstract][Full Text] [Related]
30. Single-cell Co-expression Subnetwork Analysis.
Bartlett TE; Müller S; Diaz A
Sci Rep; 2017 Nov; 7(1):15066. PubMed ID: 29118406
[TBL] [Abstract][Full Text] [Related]
31. Quantitative assessment of protein activity in orphan tissues and single cells using the metaVIPER algorithm.
Ding H; Douglass EF; Sonabend AM; Mela A; Bose S; Gonzalez C; Canoll PD; Sims PA; Alvarez MJ; Califano A
Nat Commun; 2018 Apr; 9(1):1471. PubMed ID: 29662057
[TBL] [Abstract][Full Text] [Related]
32. Statistical ensemble of gene regulatory networks of macrophage differentiation.
Castiglione F; Tieri P; Palma A; Jarrah AS
BMC Bioinformatics; 2016 Dec; 17(Suppl 19):506. PubMed ID: 28155642
[TBL] [Abstract][Full Text] [Related]
33. Spatiotemporal immune zonation of the human kidney.
Stewart BJ; Ferdinand JR; Young MD; Mitchell TJ; Loudon KW; Riding AM; Richoz N; Frazer GL; Staniforth JUL; Vieira Braga FA; Botting RA; Popescu DM; Vento-Tormo R; Stephenson E; Cagan A; Farndon SJ; Polanski K; Efremova M; Green K; Del Castillo Velasco-Herrera M; Guzzo C; Collord G; Mamanova L; Aho T; Armitage JN; Riddick ACP; Mushtaq I; Farrell S; Rampling D; Nicholson J; Filby A; Burge J; Lisgo S; Lindsay S; Bajenoff M; Warren AY; Stewart GD; Sebire N; Coleman N; Haniffa M; Teichmann SA; Behjati S; Clatworthy MR
Science; 2019 Sep; 365(6460):1461-1466. PubMed ID: 31604275
[TBL] [Abstract][Full Text] [Related]
34. Inferring population dynamics from single-cell RNA-sequencing time series data.
Fischer DS; Fiedler AK; Kernfeld EM; Genga RMJ; Bastidas-Ponce A; Bakhti M; Lickert H; Hasenauer J; Maehr R; Theis FJ
Nat Biotechnol; 2019 Apr; 37(4):461-468. PubMed ID: 30936567
[TBL] [Abstract][Full Text] [Related]
35. Deciphering Cell Fate Decision by Integrated Single-Cell Sequencing Analysis.
Sagar ; Grün D
Annu Rev Biomed Data Sci; 2020 Jul; 3():1-22. PubMed ID: 32780577
[TBL] [Abstract][Full Text] [Related]
36. Lineage specificity of gene expression patterns.
Kluger Y; Tuck DP; Chang JT; Nakayama Y; Poddar R; Kohya N; Lian Z; Ben Nasr A; Halaban HR; Krause DS; Zhang X; Newburger PE; Weissman SM
Proc Natl Acad Sci U S A; 2004 Apr; 101(17):6508-13. PubMed ID: 15096607
[TBL] [Abstract][Full Text] [Related]
37. Lineage-based identification of cellular states and expression programs.
Hashimoto T; Jaakkola T; Sherwood R; Mazzoni EO; Wichterle H; Gifford D
Bioinformatics; 2012 Jun; 28(12):i250-7. PubMed ID: 22689769
[TBL] [Abstract][Full Text] [Related]
38. Regulatory Dynamics of Cell Differentiation Revealed by True Time Series From Multinucleate Single Cells.
Pretschner A; Pabel S; Haas M; Heiner M; Marwan W
Front Genet; 2020; 11():612256. PubMed ID: 33488676
[TBL] [Abstract][Full Text] [Related]
39. Hodge Decomposition of Single-Cell RNA Velocity.
Su Z; Tong Y; Wei GW
J Chem Inf Model; 2024 Apr; 64(8):3558-3568. PubMed ID: 38572676
[TBL] [Abstract][Full Text] [Related]
40. What Is a Plant Cell Type in the Age of Single-Cell Biology? It's Complicated.
Rusnak B; Clark FK; Vadde BVL; Roeder AHK
Annu Rev Cell Dev Biol; 2024 May; ():. PubMed ID: 38724025
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
