354 related articles for article (PubMed ID: 27583687)
1. Probing the Action of Chemical Denaturant on an Intrinsically Disordered Protein by Simulation and Experiment.
Zheng W; Borgia A; Buholzer K; Grishaev A; Schuler B; Best RB
J Am Chem Soc; 2016 Sep; 138(36):11702-13. PubMed ID: 27583687
[TBL] [Abstract][Full Text] [Related]
2. Consistent View of Polypeptide Chain Expansion in Chemical Denaturants from Multiple Experimental Methods.
Borgia A; Zheng W; Buholzer K; Borgia MB; Schüler A; Hofmann H; Soranno A; Nettels D; Gast K; Grishaev A; Best RB; Schuler B
J Am Chem Soc; 2016 Sep; 138(36):11714-26. PubMed ID: 27583570
[TBL] [Abstract][Full Text] [Related]
3. Commonly used FRET fluorophores promote collapse of an otherwise disordered protein.
Riback JA; Bowman MA; Zmyslowski AM; Plaxco KW; Clark PL; Sosnick TR
Proc Natl Acad Sci U S A; 2019 Apr; 116(18):8889-8894. PubMed ID: 30992378
[TBL] [Abstract][Full Text] [Related]
4. Quantitative assessments of the distinct contributions of polypeptide backbone amides versus side chain groups to chain expansion via chemical denaturation.
Holehouse AS; Garai K; Lyle N; Vitalis A; Pappu RV
J Am Chem Soc; 2015 Mar; 137(8):2984-95. PubMed ID: 25664638
[TBL] [Abstract][Full Text] [Related]
5. Thermodynamic analysis of interactions between denaturants and protein surface exposed on unfolding: interpretation of urea and guanidinium chloride m-values and their correlation with changes in accessible surface area (ASA) using preferential interaction coefficients and the local-bulk domain model.
Courtenay ES; Capp MW; Saecker RM; Record MT
Proteins; 2000; Suppl 4():72-85. PubMed ID: 11013402
[TBL] [Abstract][Full Text] [Related]
6. Backbone and side-chain contributions in protein denaturation by urea.
Canchi DR; García AE
Biophys J; 2011 Mar; 100(6):1526-33. PubMed ID: 21402035
[TBL] [Abstract][Full Text] [Related]
7. Integrated view of internal friction in unfolded proteins from single-molecule FRET, contact quenching, theory, and simulations.
Soranno A; Holla A; Dingfelder F; Nettels D; Makarov DE; Schuler B
Proc Natl Acad Sci U S A; 2017 Mar; 114(10):E1833-E1839. PubMed ID: 28223518
[TBL] [Abstract][Full Text] [Related]
8. Molecular basis for the effect of urea and guanidinium chloride on the dynamics of unfolded polypeptide chains.
Möglich A; Krieger F; Kiefhaber T
J Mol Biol; 2005 Jan; 345(1):153-62. PubMed ID: 15567418
[TBL] [Abstract][Full Text] [Related]
9. Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations.
Merchant KA; Best RB; Louis JM; Gopich IV; Eaton WA
Proc Natl Acad Sci U S A; 2007 Jan; 104(5):1528-33. PubMed ID: 17251351
[TBL] [Abstract][Full Text] [Related]
10. Empirical Optimization of Interactions between Proteins and Chemical Denaturants in Molecular Simulations.
Zheng W; Borgia A; Borgia MB; Schuler B; Best RB
J Chem Theory Comput; 2015 Nov; 11(11):5543-53. PubMed ID: 26574341
[TBL] [Abstract][Full Text] [Related]
11. The energetics and cooperativity of protein folding: a simple experimental analysis based upon the solvation of internal residues.
Staniforth RA; Burston SG; Smith CJ; Jackson GS; Badcoe IG; Atkinson T; Holbrook JJ; Clarke AR
Biochemistry; 1993 Apr; 32(15):3842-51. PubMed ID: 8471598
[TBL] [Abstract][Full Text] [Related]
12. Small-angle X-ray scattering and single-molecule FRET spectroscopy produce highly divergent views of the low-denaturant unfolded state.
Yoo TY; Meisburger SP; Hinshaw J; Pollack L; Haran G; Sosnick TR; Plaxco K
J Mol Biol; 2012 May; 418(3-4):226-36. PubMed ID: 22306460
[TBL] [Abstract][Full Text] [Related]
13. Effect of urea on the β-hairpin conformational ensemble and protein denaturation mechanism.
Berteotti A; Barducci A; Parrinello M
J Am Chem Soc; 2011 Nov; 133(43):17200-6. PubMed ID: 21854002
[TBL] [Abstract][Full Text] [Related]
14. Single-molecule FRET study of denaturant induced unfolding of RNase H.
Kuzmenkina EV; Heyes CD; Nienhaus GU
J Mol Biol; 2006 Mar; 357(1):313-24. PubMed ID: 16426636
[TBL] [Abstract][Full Text] [Related]
15. Interactions between hydrophobic and ionic solutes in aqueous guanidinium chloride and urea solutions: lessons for protein denaturation mechanism.
O'Brien EP; Dima RI; Brooks B; Thirumalai D
J Am Chem Soc; 2007 Jun; 129(23):7346-53. PubMed ID: 17503819
[TBL] [Abstract][Full Text] [Related]
16. Modest influence of FRET chromophores on the properties of unfolded proteins.
Zerze GH; Best RB; Mittal J
Biophys J; 2014 Oct; 107(7):1654-60. PubMed ID: 25296318
[TBL] [Abstract][Full Text] [Related]
17. Collapse Precedes Folding in Denaturant-Dependent Assembly of Ubiquitin.
Reddy G; Thirumalai D
J Phys Chem B; 2017 Feb; 121(5):995-1009. PubMed ID: 28076957
[TBL] [Abstract][Full Text] [Related]
18. On the NMR analysis of pKa values in the unfolded state of proteins by extrapolation to zero denaturant.
Quijada J; López G; Versace R; Ramírez L; Tasayco ML
Biophys Chem; 2007 Sep; 129(2-3):242-50. PubMed ID: 17611012
[TBL] [Abstract][Full Text] [Related]
19. Random coil negative control reproduces the discrepancy between scattering and FRET measurements of denatured protein dimensions.
Watkins HM; Simon AJ; Sosnick TR; Lipman EA; Hjelm RP; Plaxco KW
Proc Natl Acad Sci U S A; 2015 May; 112(21):6631-6. PubMed ID: 25964362
[TBL] [Abstract][Full Text] [Related]
20. Protein folding: Molecular dynamics simulations and in vitro studies for probing mechanism of urea- and guanidinium chloride-induced unfolding of horse cytochrome-c.
Khan SH; Prakash A; Pandey P; Lynn AM; Islam A; Hassan MI; Ahmad F
Int J Biol Macromol; 2019 Feb; 122():695-704. PubMed ID: 30389526
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
