517 related articles for article (PubMed ID: 27591685)
1. Improved prediction of bilayer and monolayer properties using a refined BMW-MARTINI force field.
Miguel V; Perillo MA; Villarreal MA
Biochim Biophys Acta; 2016 Nov; 1858(11):2903-2910. PubMed ID: 27591685
[TBL] [Abstract][Full Text] [Related]
2. MARTINI Coarse-Grained Model of Triton TX-100 in Pure DPPC Monolayer and Bilayer Interfaces.
Pizzirusso A; De Nicola A; Milano G
J Phys Chem B; 2016 Apr; 120(16):3821-32. PubMed ID: 27042862
[TBL] [Abstract][Full Text] [Related]
3. DPPC-cholesterol phase diagram using coarse-grained Molecular Dynamics simulations.
Wang Y; Gkeka P; Fuchs JE; Liedl KR; Cournia Z
Biochim Biophys Acta; 2016 Nov; 1858(11):2846-2857. PubMed ID: 27526680
[TBL] [Abstract][Full Text] [Related]
4. Intramolecular structural parameters are key modulators of the gel-liquid transition in coarse grained simulations of DPPC and DOPC lipid bilayers.
Jaschonek S; Cascella M; Gauss J; Diezemann G; Milano G
Biochem Biophys Res Commun; 2018 Mar; 498(2):327-333. PubMed ID: 29101041
[TBL] [Abstract][Full Text] [Related]
5. Coarse-grained bond and angle distributions from atomistic simulations: On the systematic parameterisation of lipid models.
Genheden S
J Mol Graph Model; 2016 Jan; 63():57-64. PubMed ID: 26655333
[TBL] [Abstract][Full Text] [Related]
6. Predictions of phase separation in three-component lipid membranes by the MARTINI force field.
Davis RS; Sunil Kumar PB; Sperotto MM; Laradji M
J Phys Chem B; 2013 Apr; 117(15):4072-80. PubMed ID: 23534606
[TBL] [Abstract][Full Text] [Related]
7. A New Coarse-Grained Force Field for Membrane-Peptide Simulations.
Wu Z; Cui Q; Yethiraj A
J Chem Theory Comput; 2011 Nov; 7(11):3793-802. PubMed ID: 26598270
[TBL] [Abstract][Full Text] [Related]
8. Mixing MARTINI: electrostatic coupling in hybrid atomistic-coarse-grained biomolecular simulations.
Wassenaar TA; Ingólfsson HI; Priess M; Marrink SJ; Schäfer LV
J Phys Chem B; 2013 Apr; 117(13):3516-30. PubMed ID: 23406326
[TBL] [Abstract][Full Text] [Related]
9. Evaluating Coarse-Grained MARTINI Force-Fields for Capturing the Ripple Phase of Lipid Membranes.
Sharma P; Desikan R; Ayappa KG
J Phys Chem B; 2021 Jun; 125(24):6587-6599. PubMed ID: 34081861
[TBL] [Abstract][Full Text] [Related]
10. Evaluating Force Fields for the Computational Prediction of Ionized Arginine and Lysine Side-Chains Partitioning into Lipid Bilayers and Octanol.
Sun D; Forsman J; Woodward CE
J Chem Theory Comput; 2015 Apr; 11(4):1775-91. PubMed ID: 26574387
[TBL] [Abstract][Full Text] [Related]
11. Swing motion as a diffusion mechanism of lipid bilayers in a gel phase.
Oh Y; Kim J; Yethiraj A; Sung BJ
Phys Rev E; 2016 Jan; 93(1):012409. PubMed ID: 26871103
[TBL] [Abstract][Full Text] [Related]
12. Computer simulations of the phase separation in model membranes.
Baoukina S; Mendez-Villuendas E; Bennett WF; Tieleman DP
Faraday Discuss; 2013; 161():63-75; discussion 113-50. PubMed ID: 23805738
[TBL] [Abstract][Full Text] [Related]
13. Comparison of ternary bilayer mixtures with asymmetric or symmetric unsaturated phosphatidylcholine lipids by coarse grained molecular dynamics simulations.
Rosetti C; Pastorino C
J Phys Chem B; 2012 Mar; 116(11):3525-37. PubMed ID: 22369354
[TBL] [Abstract][Full Text] [Related]
14. Translocation thermodynamics of linear and cyclic nonaarginine into model DPPC bilayer via coarse-grained molecular dynamics simulation: implications of pore formation and nonadditivity.
Hu Y; Liu X; Sinha SK; Patel S
J Phys Chem B; 2014 Mar; 118(10):2670-82. PubMed ID: 24506488
[TBL] [Abstract][Full Text] [Related]
15. Surface tension effects on the phase transition of a DPPC bilayer with and without protein: a molecular dynamics simulation.
Kong X; Qin S; Lu D; Liu Z
Phys Chem Chem Phys; 2014 May; 16(18):8434-40. PubMed ID: 24668218
[TBL] [Abstract][Full Text] [Related]
16. Enhanced Sampling of Phase Transitions in Coarse-Grained Lipid Bilayers.
Stelter D; Keyes T
J Phys Chem B; 2017 Jun; 121(23):5770-5780. PubMed ID: 28530813
[TBL] [Abstract][Full Text] [Related]
17. Coarse-grained computational studies of supported bilayers: current problems and their root causes.
Lamberg A; Taniguchi T
J Phys Chem B; 2014 Sep; 118(36):10643-52. PubMed ID: 25180538
[TBL] [Abstract][Full Text] [Related]
18. Extension of CAVS coarse-grained model to phospholipid membranes: The importance of electrostatics.
Shen H; Deng M; Zhang Y
J Comput Chem; 2017 May; 38(13):971-980. PubMed ID: 28266037
[TBL] [Abstract][Full Text] [Related]
19. Automatic Optimization of Lipid Models in the Martini Force Field Using
Empereur-Mot C; Pedersen KB; Capelli R; Crippa M; Caruso C; Perrone M; Souza PCT; Marrink SJ; Pavan GM
J Chem Inf Model; 2023 Jun; 63(12):3827-3838. PubMed ID: 37279107
[TBL] [Abstract][Full Text] [Related]
20. Imidazolium-Based Lipid Analogues and Their Interaction with Phosphatidylcholine Membranes.
Wang D; de Jong DH; Rühling A; Lesch V; Shimizu K; Wulff S; Heuer A; Glorius F; Galla HJ
Langmuir; 2016 Dec; 32(48):12579-12592. PubMed ID: 27934518
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]