BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

2139 related articles for article (PubMed ID: 27609714)

  • 1. Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum.
    Hahn A; Sanyal A; Perez GF; Colberg-Poley AM; Campos J; Rose MC; Pérez-Losada M
    J Microbiol Methods; 2016 Nov; 130():95-99. PubMed ID: 27609714
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
    Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
    BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification.
    Wagner J; Coupland P; Browne HP; Lawley TD; Francis SC; Parkhill J
    BMC Microbiol; 2016 Nov; 16(1):274. PubMed ID: 27842515
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome.
    Allali I; Arnold JW; Roach J; Cadenas MB; Butz N; Hassan HM; Koci M; Ballou A; Mendoza M; Ali R; Azcarate-Peril MA
    BMC Microbiol; 2017 Sep; 17(1):194. PubMed ID: 28903732
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers.
    Myer PR; Kim M; Freetly HC; Smith TPL
    J Microbiol Methods; 2016 Aug; 127():132-140. PubMed ID: 27282101
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Sputum DNA sequencing in cystic fibrosis: non-invasive access to the lung microbiome and to pathogen details.
    Feigelman R; Kahlert CR; Baty F; Rassouli F; Kleiner RL; Kohler P; Brutsche MH; von Mering C
    Microbiome; 2017 Feb; 5(1):20. PubMed ID: 28187782
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome.
    Salamon D; Zapała B; Krawczyk A; Potasiewicz A; Nikiforuk A; Stój A; Gosiewski T
    Appl Microbiol Biotechnol; 2022 Nov; 106(22):7671-7681. PubMed ID: 36322250
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The metabolic footprint of the airway bacterial community in cystic fibrosis.
    Narayanamurthy V; Sweetnam JM; Denner DR; Chen LW; Naureckas ET; Laxman B; White SR
    Microbiome; 2017 Jun; 5(1):67. PubMed ID: 28666467
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Individual Patterns of Complexity in Cystic Fibrosis Lung Microbiota, Including Predator Bacteria, over a 1-Year Period.
    de Dios Caballero J; Vida R; Cobo M; Máiz L; Suárez L; Galeano J; Baquero F; Cantón R; Del Campo R
    mBio; 2017 Sep; 8(5):. PubMed ID: 28951476
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Full-length 16S rRNA gene sequencing by PacBio improves taxonomic resolution in human microbiome samples.
    Buetas E; Jordán-López M; López-Roldán A; D'Auria G; Martínez-Priego L; De Marco G; Carda-Diéguez M; Mira A
    BMC Genomics; 2024 Mar; 25(1):310. PubMed ID: 38528457
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Fungal and Bacterial Diversity of Airway Microbiota in Adults with Cystic Fibrosis: Concordance Between Conventional Methods and Ultra-Deep Sequencing, and Their Practical use in the Clinical Laboratory.
    Botterel F; Angebault C; Cabaret O; Stressmann FA; Costa JM; Wallet F; Wallaert B; Bruce K; Delhaes L
    Mycopathologia; 2018 Feb; 183(1):171-183. PubMed ID: 28766039
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Improved OTU-picking using long-read 16S rRNA gene amplicon sequencing and generic hierarchical clustering.
    Franzén O; Hu J; Bao X; Itzkowitz SH; Peter I; Bashir A
    Microbiome; 2015 Oct; 3():43. PubMed ID: 26434730
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Species classifier choice is a key consideration when analysing low-complexity food microbiome data.
    Walsh AM; Crispie F; O'Sullivan O; Finnegan L; Claesson MJ; Cotter PD
    Microbiome; 2018 Mar; 6(1):50. PubMed ID: 29554948
    [TBL] [Abstract][Full Text] [Related]  

  • 14. An extended single-index multiplexed 16S rRNA sequencing for microbial community analysis on MiSeq illumina platforms.
    Derakhshani H; Tun HM; Khafipour E
    J Basic Microbiol; 2016 Mar; 56(3):321-6. PubMed ID: 26426811
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The altered gut microbiota in adults with cystic fibrosis.
    Burke DG; Fouhy F; Harrison MJ; Rea MC; Cotter PD; O'Sullivan O; Stanton C; Hill C; Shanahan F; Plant BJ; Ross RP
    BMC Microbiol; 2017 Mar; 17(1):58. PubMed ID: 28279152
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Purifying the impure: sequencing metagenomes and metatranscriptomes from complex animal-associated samples.
    Lim YW; Haynes M; Furlan M; Robertson CE; Harris JK; Rohwer F
    J Vis Exp; 2014 Dec; (94):. PubMed ID: 25549184
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Metagenomic study of bacterial microbiota in persistent endodontic infections using Next-generation sequencing.
    Sánchez-Sanhueza G; Bello-Toledo H; González-Rocha G; Gonçalves AT; Valenzuela V; Gallardo-Escárate C
    Int Endod J; 2018 Dec; 51(12):1336-1348. PubMed ID: 29786880
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Pipeline for amplifying and analyzing amplicons of the V1-V3 region of the 16S rRNA gene.
    Allen HK; Bayles DO; Looft T; Trachsel J; Bass BE; Alt DP; Bearson SM; Nicholson T; Casey TA
    BMC Res Notes; 2016 Aug; 9():380. PubMed ID: 27485508
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The effects of inhaled aztreonam on the cystic fibrosis lung microbiome.
    Heirali AA; Workentine ML; Acosta N; Poonja A; Storey DG; Somayaji R; Rabin HR; Whelan FJ; Surette MG; Parkins MD
    Microbiome; 2017 May; 5(1):51. PubMed ID: 28476135
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections.
    Salipante SJ; Sengupta DJ; Rosenthal C; Costa G; Spangler J; Sims EH; Jacobs MA; Miller SI; Hoogestraat DR; Cookson BT; McCoy C; Matsen FA; Shendure J; Lee CC; Harkins TT; Hoffman NG
    PLoS One; 2013; 8(5):e65226. PubMed ID: 23734239
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 107.