BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

336 related articles for article (PubMed ID: 27632220)

  • 1. Estimating Copy Number and Allelic Variation at the Immunoglobulin Heavy Chain Locus Using Short Reads.
    Luo S; Yu JA; Song YS
    PLoS Comput Biol; 2016 Sep; 12(9):e1005117. PubMed ID: 27632220
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Complete haplotype sequence of the human immunoglobulin heavy-chain variable, diversity, and joining genes and characterization of allelic and copy-number variation.
    Watson CT; Steinberg KM; Huddleston J; Warren RL; Malig M; Schein J; Willsey AJ; Joy JB; Scott JK; Graves TA; Wilson RK; Holt RA; Eichler EE; Breden F
    Am J Hum Genet; 2013 Apr; 92(4):530-46. PubMed ID: 23541343
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Segmental duplication as one of the driving forces underlying the diversity of the human immunoglobulin heavy chain variable gene region.
    Pramanik S; Cui X; Wang HY; Chimge NO; Hu G; Shen L; Gao R; Li H
    BMC Genomics; 2011 Jan; 12():78. PubMed ID: 21272357
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping.
    Gidoni M; Snir O; Peres A; Polak P; Lindeman I; Mikocziova I; Sarna VK; Lundin KEA; Clouser C; Vigneault F; Collins AM; Sollid LM; Yaari G
    Nat Commun; 2019 Feb; 10(1):628. PubMed ID: 30733445
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Worldwide genetic variation of the IGHV and TRBV immune receptor gene families in humans.
    Luo S; Yu JA; Li H; Song YS
    Life Sci Alliance; 2019 Apr; 2(2):. PubMed ID: 30808649
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Critical steps for computational inference of the 3'-end of novel alleles of immunoglobulin heavy chain variable genes - illustrated by an allele of IGHV3-7.
    Thörnqvist L; Ohlin M
    Mol Immunol; 2018 Nov; 103():1-6. PubMed ID: 30172112
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A Novel Framework for Characterizing Genomic Haplotype Diversity in the Human Immunoglobulin Heavy Chain Locus.
    Rodriguez OL; Gibson WS; Parks T; Emery M; Powell J; Strahl M; Deikus G; Auckland K; Eichler EE; Marasco WA; Sebra R; Sharp AJ; Smith ML; Bashir A; Watson CT
    Front Immunol; 2020; 11():2136. PubMed ID: 33072076
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genomic screening by 454 pyrosequencing identifies a new human IGHV gene and sixteen other new IGHV allelic variants.
    Wang Y; Jackson KJ; Gäeta B; Pomat W; Siba P; Sewell WA; Collins AM
    Immunogenetics; 2011 May; 63(5):259-65. PubMed ID: 21249354
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Systematic inference of copy-number genotypes from personal genome sequencing data reveals extensive olfactory receptor gene content diversity.
    Waszak SM; Hasin Y; Zichner T; Olender T; Keydar I; Khen M; Stütz AM; Schlattl A; Lancet D; Korbel JO
    PLoS Comput Biol; 2010 Nov; 6(11):e1000988. PubMed ID: 21085617
    [TBL] [Abstract][Full Text] [Related]  

  • 10. ImmunoTyper-SR: A computational approach for genotyping immunoglobulin heavy chain variable genes using short-read data.
    Ford MKB; Hari A; Rodriguez O; Xu J; Lack J; Oguz C; Zhang Y; Weber S; Magliocco M; Barnett J; Xirasagar S; Samuel S; Imberti L; Bonfanti P; Biondi A; Dalgard CL; Chanock S; Rosen L; Holland S; Su H; Notarangelo L; ; Vishkin U; Watson CT; Sahinalp SC
    Cell Syst; 2022 Oct; 13(10):808-816.e5. PubMed ID: 36265467
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Inferred Allelic Variants of Immunoglobulin Receptor Genes: A System for Their Evaluation, Documentation, and Naming.
    Ohlin M; Scheepers C; Corcoran M; Lees WD; Busse CE; Bagnara D; Thörnqvist L; Bürckert JP; Jackson KJL; Ralph D; Schramm CA; Marthandan N; Breden F; Scott J; Matsen Iv FA; Greiff V; Yaari G; Kleinstein SH; Christley S; Sherkow JS; Kossida S; Lefranc MP; van Zelm MC; Watson CT; Collins AM
    Front Immunol; 2019; 10():435. PubMed ID: 30936866
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evolutionary dynamics of the immunoglobulin heavy chain variable region genes in vertebrates.
    Das S; Nozawa M; Klein J; Nei M
    Immunogenetics; 2008 Jan; 60(1):47-55. PubMed ID: 18196235
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Poorly Expressed Alleles of Several Human Immunoglobulin Heavy Chain Variable Genes are Common in the Human Population.
    Ohlin M
    Front Immunol; 2020; 11():603980. PubMed ID: 33717051
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comprehensive assessment of potential multiple myeloma immunoglobulin heavy chain V-D-J intraclonal variation using massively parallel pyrosequencing.
    Tschumper RC; Asmann YW; Hossain A; Huddleston PM; Wu X; Dispenzieri A; Eckloff BW; Jelinek DF
    Oncotarget; 2012 Apr; 3(4):502-13. PubMed ID: 22522905
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Determining multiallelic complex copy number and sequence variation from high coverage exome sequencing data.
    Forni D; Martin D; Abujaber R; Sharp AJ; Sironi M; Hollox EJ
    BMC Genomics; 2015 Nov; 16():891. PubMed ID: 26526070
    [TBL] [Abstract][Full Text] [Related]  

  • 16. High-throughput Interpretation of Killer-cell Immunoglobulin-like Receptor Short-read Sequencing Data with PING.
    Marin WM; Dandekar R; Augusto DG; Yusufali T; Heyn B; Hofmann J; Lange V; Sauter J; Norman PJ; Hollenbach JA
    PLoS Comput Biol; 2021 Aug; 17(8):e1008904. PubMed ID: 34339413
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The inference of phased haplotypes for the immunoglobulin H chain V region gene loci by analysis of VDJ gene rearrangements.
    Kidd MJ; Chen Z; Wang Y; Jackson KJ; Zhang L; Boyd SD; Fire AZ; Tanaka MM; Gaëta BA; Collins AM
    J Immunol; 2012 Feb; 188(3):1333-40. PubMed ID: 22205028
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Using de novo assembly to identify structural variation of eight complex immune system gene regions.
    Zhang JY; Roberts H; Flores DSC; Cutler AJ; Brown AC; Whalley JP; Mielczarek O; Buck D; Lockstone H; Xella B; Oliver K; Corton C; Betteridge E; Bashford-Rogers R; Knight JC; Todd JA; Band G
    PLoS Comput Biol; 2021 Aug; 17(8):e1009254. PubMed ID: 34343164
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Computational Inference, Validation, and Analysis of 5'UTR-Leader Sequences of Alleles of Immunoglobulin Heavy Chain Variable Genes.
    Huang Y; Thörnqvist L; Ohlin M
    Front Immunol; 2021; 12():730105. PubMed ID: 34671351
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Bamgineer: Introduction of simulated allele-specific copy number variants into exome and targeted sequence data sets.
    Samadian S; Bruce JP; Pugh TJ
    PLoS Comput Biol; 2018 Mar; 14(3):e1006080. PubMed ID: 29590101
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.