These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Next-Generation Sequencing Analysis of Long Noncoding RNAs in CD4+ T Cell Differentiation. Ranzani V; Arrigoni A; Rossetti G; Panzeri I; Abrignani S; Bonnal RJ; Pagani M Methods Mol Biol; 2017; 1514():173-185. PubMed ID: 27787801 [TBL] [Abstract][Full Text] [Related]
3. An update on recent methods applied for deciphering the diversity of the noncoding RNA genome structure and function. Spicuglia S; Maqbool MA; Puthier D; Andrau JC Methods; 2013 Sep; 63(1):3-17. PubMed ID: 23597756 [TBL] [Abstract][Full Text] [Related]
4. Methods to Study Long Noncoding RNA Expression and Dynamics in Zebrafish Using RNA Sequencing. Mathew S; Sivadas A; Sehgal P; Kaushik K; Vellarikkal SK; Scaria V; Sivasubbu S Methods Mol Biol; 2019; 1912():77-110. PubMed ID: 30635891 [TBL] [Abstract][Full Text] [Related]
5. PacBio single molecule long-read sequencing provides insight into the complexity and diversity of the Pinctada fucata martensii transcriptome. Zhang H; Xu H; Liu H; Pan X; Xu M; Zhang G; He M BMC Genomics; 2020 Jul; 21(1):481. PubMed ID: 32660426 [TBL] [Abstract][Full Text] [Related]
7. Targeted LncRNA Sequencing with the SeqCap RNA Enrichment System. Tan JC; Bouriakov VD; Feng L; Richmond TA; Burgess D Methods Mol Biol; 2016; 1402():73-100. PubMed ID: 26721485 [TBL] [Abstract][Full Text] [Related]
8. Bioinformatics Approaches to Studying Plant Long Noncoding RNAs (lncRNAs): Identification and Functional Interpretation of lncRNAs from RNA-Seq Data Sets. Sun HX; Chua NH Methods Mol Biol; 2019; 1933():197-205. PubMed ID: 30945186 [TBL] [Abstract][Full Text] [Related]
9. Transcriptome Sequencing: RNA-Seq. Zhang H; He L; Cai L Methods Mol Biol; 2018; 1754():15-27. PubMed ID: 29536435 [TBL] [Abstract][Full Text] [Related]
10. Studying Isoform-Specific mRNA Recruitment to Polyribosomes with Frac-seq. Martinez-Nunez RT; Sanford JR Methods Mol Biol; 2016; 1358():99-108. PubMed ID: 26463379 [TBL] [Abstract][Full Text] [Related]
11. Universal Alternative Splicing of Noncoding Exons. Deveson IW; Brunck ME; Blackburn J; Tseng E; Hon T; Clark TA; Clark MB; Crawford J; Dinger ME; Nielsen LK; Mattick JS; Mercer TR Cell Syst; 2018 Feb; 6(2):245-255.e5. PubMed ID: 29396323 [TBL] [Abstract][Full Text] [Related]
12. Brachypodium distachyon Long Noncoding RNAs: Genome-Wide Identification and Expression Analysis. De Quattro C; Mica E; Pè ME; Bertolini E Methods Mol Biol; 2018; 1667():31-42. PubMed ID: 29039001 [TBL] [Abstract][Full Text] [Related]
13. De Novo Identification of sRNA Loci and Non-coding RNAs by High-Throughput Sequencing. Lunardon A; Forestan C; Farinati S; Varotto S Methods Mol Biol; 2018; 1675():297-314. PubMed ID: 29052198 [TBL] [Abstract][Full Text] [Related]
14. Transcriptome sequencing uncovers novel long noncoding and small nucleolar RNAs dysregulated in head and neck squamous cell carcinoma. Zou AE; Ku J; Honda TK; Yu V; Kuo SZ; Zheng H; Xuan Y; Saad MA; Hinton A; Brumund KT; Lin JH; Wang-Rodriguez J; Ongkeko WM RNA; 2015 Jun; 21(6):1122-34. PubMed ID: 25904139 [TBL] [Abstract][Full Text] [Related]
15. Comprehensive discovery of noncoding RNAs in acute myeloid leukemia cell transcriptomes. Zhang J; Griffith M; Miller CA; Griffith OL; Spencer DH; Walker JR; Magrini V; McGrath SD; Ly A; Helton NM; Trissal M; Link DC; Dang HX; Larson DE; Kulkarni S; Cordes MG; Fronick CC; Fulton RS; Klco JM; Mardis ER; Ley TJ; Wilson RK; Maher CA Exp Hematol; 2017 Nov; 55():19-33. PubMed ID: 28760689 [TBL] [Abstract][Full Text] [Related]
16. Improved definition of the mouse transcriptome via targeted RNA sequencing. Bussotti G; Leonardi T; Clark MB; Mercer TR; Crawford J; Malquori L; Notredame C; Dinger ME; Mattick JS; Enright AJ Genome Res; 2016 May; 26(5):705-16. PubMed ID: 27197243 [TBL] [Abstract][Full Text] [Related]
17. Identification and Expression Analysis of Long Intergenic Noncoding RNAs. Sun MA; Zhai R; Zhang Q; Wang Y Methods Mol Biol; 2018; 1751():139-152. PubMed ID: 29508295 [TBL] [Abstract][Full Text] [Related]
18. Transcriptome-wide identification of RNA binding sites by CLIP-seq. Murigneux V; Saulière J; Roest Crollius H; Le Hir H Methods; 2013 Sep; 63(1):32-40. PubMed ID: 23545196 [TBL] [Abstract][Full Text] [Related]