683 related articles for article (PubMed ID: 27662874)
1. Computational Approaches for Mining GRO-Seq Data to Identify and Characterize Active Enhancers.
Nagari A; Murakami S; Malladi VS; Kraus WL
Methods Mol Biol; 2017; 1468():121-38. PubMed ID: 27662874
[TBL] [Abstract][Full Text] [Related]
2. groHMM: a computational tool for identifying unannotated and cell type-specific transcription units from global run-on sequencing data.
Chae M; Danko CG; Kraus WL
BMC Bioinformatics; 2015 Jul; 16():222. PubMed ID: 26173492
[TBL] [Abstract][Full Text] [Related]
3. Identification of Transcribed Enhancers by Genome-Wide Chromatin Immunoprecipitation Sequencing.
Blinka S; Reimer MH; Pulakanti K; Pinello L; Yuan GC; Rao S
Methods Mol Biol; 2017; 1468():91-109. PubMed ID: 27662872
[TBL] [Abstract][Full Text] [Related]
4. Enhancer RNAs: a class of long noncoding RNAs synthesized at enhancers.
Kim TK; Hemberg M; Gray JM
Cold Spring Harb Perspect Biol; 2015 Jan; 7(1):a018622. PubMed ID: 25561718
[TBL] [Abstract][Full Text] [Related]
5. Identifying transcription start sites and active enhancer elements using BruUV-seq.
Magnuson B; Veloso A; Kirkconnell KS; de Andrade Lima LC; Paulsen MT; Ljungman EA; Bedi K; Prasad J; Wilson TE; Ljungman M
Sci Rep; 2015 Dec; 5():17978. PubMed ID: 26656874
[TBL] [Abstract][Full Text] [Related]
6. Inflammation-sensitive super enhancers form domains of coordinately regulated enhancer RNAs.
Hah N; Benner C; Chong LW; Yu RT; Downes M; Evans RM
Proc Natl Acad Sci U S A; 2015 Jan; 112(3):E297-302. PubMed ID: 25564661
[TBL] [Abstract][Full Text] [Related]
7. Lessons from eRNAs: understanding transcriptional regulation through the lens of nascent RNAs.
Cardiello JF; Sanchez GJ; Allen MA; Dowell RD
Transcription; 2020 Feb; 11(1):3-18. PubMed ID: 31856658
[TBL] [Abstract][Full Text] [Related]
8. Non-coding Transcripts from Enhancers: New Insights into Enhancer Activity and Gene Expression Regulation.
Chen H; Du G; Song X; Li L
Genomics Proteomics Bioinformatics; 2017 Jun; 15(3):201-207. PubMed ID: 28599852
[TBL] [Abstract][Full Text] [Related]
9. Enhancer RNAs: a missing regulatory layer in gene transcription.
Mao R; Wu Y; Ming Y; Xu Y; Wang S; Chen X; Wang X; Fan Y
Sci China Life Sci; 2019 Jul; 62(7):905-912. PubMed ID: 30593613
[TBL] [Abstract][Full Text] [Related]
10. Illuminating Enhancer Transcription at Nucleotide Resolution with Native Elongating Transcript Sequencing (NET-Seq).
Jasnovidova O; Arnold M; Mayer A
Methods Mol Biol; 2021; 2351():41-65. PubMed ID: 34382183
[TBL] [Abstract][Full Text] [Related]
11. Super-Enhancers at the Nanog Locus Differentially Regulate Neighboring Pluripotency-Associated Genes.
Blinka S; Reimer MH; Pulakanti K; Rao S
Cell Rep; 2016 Sep; 17(1):19-28. PubMed ID: 27681417
[TBL] [Abstract][Full Text] [Related]
12. Using GRO-Seq to Measure Circadian Transcription and Discover Circadian Enhancers.
Fang B; Guan D; Lazar MA
Methods Mol Biol; 2021; 2130():127-148. PubMed ID: 33284441
[TBL] [Abstract][Full Text] [Related]
13. Enhancer transcripts mark active estrogen receptor binding sites.
Hah N; Murakami S; Nagari A; Danko CG; Kraus WL
Genome Res; 2013 Aug; 23(8):1210-23. PubMed ID: 23636943
[TBL] [Abstract][Full Text] [Related]
14. Nascent RNA sequencing analysis provides insights into enhancer-mediated gene regulation.
Wang J; Zhao Y; Zhou X; Hiebert SW; Liu Q; Shyr Y
BMC Genomics; 2018 Aug; 19(1):633. PubMed ID: 30139328
[TBL] [Abstract][Full Text] [Related]
15. Spirits in the Material World: Enhancer RNAs in Transcriptional Regulation.
Hou TY; Kraus WL
Trends Biochem Sci; 2021 Feb; 46(2):138-153. PubMed ID: 32888773
[TBL] [Abstract][Full Text] [Related]
16. Global Run-on Sequencing (GRO-Seq).
Tzerpos P; Daniel B; Nagy L
Methods Mol Biol; 2021; 2351():25-39. PubMed ID: 34382182
[TBL] [Abstract][Full Text] [Related]
17. GRO-seq, A Tool for Identification of Transcripts Regulating Gene Expression.
Lopes R; Agami R; Korkmaz G
Methods Mol Biol; 2017; 1543():45-55. PubMed ID: 28349421
[TBL] [Abstract][Full Text] [Related]
18. Integrator mediates the biogenesis of enhancer RNAs.
Lai F; Gardini A; Zhang A; Shiekhattar R
Nature; 2015 Sep; 525(7569):399-403. PubMed ID: 26308897
[TBL] [Abstract][Full Text] [Related]
19. Enhancer RNAs step forward: new insights into enhancer function.
Harrison LJ; Bose D
Development; 2022 Aug; 149(16):. PubMed ID: 36039999
[TBL] [Abstract][Full Text] [Related]
20. Enhancer RNA-driven looping enhances the transcription of the long noncoding RNA DHRS4-AS1, a controller of the DHRS4 gene cluster.
Yang Y; Su Z; Song X; Liang B; Zeng F; Chang X; Huang D
Sci Rep; 2016 Feb; 6():20961. PubMed ID: 26864944
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
