These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

224 related articles for article (PubMed ID: 27665592)

  • 41. Combining structure probing data on RNA mutants with evolutionary information reveals RNA-binding interfaces.
    Reinharz V; Ponty Y; Waldispühl J
    Nucleic Acids Res; 2016 Jun; 44(11):e104. PubMed ID: 27095200
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Free energy minimization to predict RNA secondary structures and computational RNA design.
    Churkin A; Weinbrand L; Barash D
    Methods Mol Biol; 2015; 1269():3-16. PubMed ID: 25577369
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Heuristic RNA pseudoknot prediction including intramolecular kissing hairpins.
    Sperschneider J; Datta A; Wise MJ
    RNA; 2011 Jan; 17(1):27-38. PubMed ID: 21098139
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Recent advances in RNA folding.
    Fallmann J; Will S; Engelhardt J; Grüning B; Backofen R; Stadler PF
    J Biotechnol; 2017 Nov; 261():97-104. PubMed ID: 28690134
    [TBL] [Abstract][Full Text] [Related]  

  • 45. PSRna: Prediction of small RNA secondary structures based on reverse complementary folding method.
    Li J; Xu C; Wang L; Liang H; Feng W; Cai Z; Wang Y; Cong W; Liu Y
    J Bioinform Comput Biol; 2016 Aug; 14(4):1643001. PubMed ID: 27045556
    [TBL] [Abstract][Full Text] [Related]  

  • 46. incaRNAfbinv: a web server for the fragment-based design of RNA sequences.
    Drory Retwitzer M; Reinharz V; Ponty Y; Waldispühl J; Barash D
    Nucleic Acids Res; 2016 Jul; 44(W1):W308-14. PubMed ID: 27185893
    [TBL] [Abstract][Full Text] [Related]  

  • 47. RNA2DMut: a web tool for the design and analysis of RNA structure mutations.
    Moss WN
    RNA; 2018 Mar; 24(3):273-286. PubMed ID: 29183923
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Swellix: a computational tool to explore RNA conformational space.
    Sloat N; Liu JW; Schroeder SJ
    BMC Bioinformatics; 2017 Nov; 18(1):504. PubMed ID: 29157200
    [TBL] [Abstract][Full Text] [Related]  

  • 49. INFO-RNA--a server for fast inverse RNA folding satisfying sequence constraints.
    Busch A; Backofen R
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W310-3. PubMed ID: 17452349
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Base pair probability estimates improve the prediction accuracy of RNA non-canonical base pairs.
    Sloma MF; Mathews DH
    PLoS Comput Biol; 2017 Nov; 13(11):e1005827. PubMed ID: 29107980
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Concepts and introduction to RNA bioinformatics.
    Gorodkin J; Hofacker IL; Ruzzo WL
    Methods Mol Biol; 2014; 1097():1-31. PubMed ID: 24639152
    [TBL] [Abstract][Full Text] [Related]  

  • 52. Computational prediction of RNA-RNA interactions.
    Backofen R
    Methods Mol Biol; 2014; 1097():417-35. PubMed ID: 24639170
    [TBL] [Abstract][Full Text] [Related]  

  • 53. RNApdbee 2.0: multifunctional tool for RNA structure annotation.
    Zok T; Antczak M; Zurkowski M; Popenda M; Blazewicz J; Adamiak RW; Szachniuk M
    Nucleic Acids Res; 2018 Jul; 46(W1):W30-W35. PubMed ID: 29718468
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Frnakenstein: multiple target inverse RNA folding.
    Lyngsø RB; Anderson JW; Sizikova E; Badugu A; Hyland T; Hein J
    BMC Bioinformatics; 2012 Oct; 13():260. PubMed ID: 23043260
    [TBL] [Abstract][Full Text] [Related]  

  • 55. RNAdualPF: software to compute the dual partition function with sample applications in molecular evolution theory.
    Garcia-Martin JA; Bayegan AH; Dotu I; Clote P
    BMC Bioinformatics; 2016 Oct; 17(1):424. PubMed ID: 27756204
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Topology and prediction of RNA pseudoknots.
    Reidys CM; Huang FW; Andersen JE; Penner RC; Stadler PF; Nebel ME
    Bioinformatics; 2011 Apr; 27(8):1076-85. PubMed ID: 21335320
    [TBL] [Abstract][Full Text] [Related]  

  • 57. A Unified Dynamic Programming Framework for the Analysis of Interacting Nucleic Acid Strands: Enhanced Models, Scalability, and Speed.
    Fornace ME; Porubsky NJ; Pierce NA
    ACS Synth Biol; 2020 Oct; 9(10):2665-2678. PubMed ID: 32910644
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Computational prediction of RNA secondary structure.
    Moss WN
    Methods Enzymol; 2013; 530():3-65. PubMed ID: 24034313
    [TBL] [Abstract][Full Text] [Related]  

  • 59. pknotsRG: RNA pseudoknot folding including near-optimal structures and sliding windows.
    Reeder J; Steffen P; Giegerich R
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W320-4. PubMed ID: 17478505
    [TBL] [Abstract][Full Text] [Related]  

  • 60. Predicting RNA structure: advances and limitations.
    Hofacker IL; Lorenz R
    Methods Mol Biol; 2014; 1086():1-19. PubMed ID: 24136595
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 12.