199 related articles for article (PubMed ID: 27700092)
1. An Automated Pipeline to Monitor System Performance in Liquid Chromatography-Tandem Mass Spectrometry Proteomic Experiments.
Bereman MS; Beri J; Sharma V; Nathe C; Eckels J; MacLean B; MacCoss MJ
J Proteome Res; 2016 Dec; 15(12):4763-4769. PubMed ID: 27700092
[TBL] [Abstract][Full Text] [Related]
2. Tools for monitoring system suitability in LC MS/MS centric proteomic experiments.
Bereman MS
Proteomics; 2015 Mar; 15(5-6):891-902. PubMed ID: 25327420
[TBL] [Abstract][Full Text] [Related]
3. Implementation of statistical process control for proteomic experiments via LC MS/MS.
Bereman MS; Johnson R; Bollinger J; Boss Y; Shulman N; MacLean B; Hoofnagle AN; MacCoss MJ
J Am Soc Mass Spectrom; 2014 Apr; 25(4):581-7. PubMed ID: 24496601
[TBL] [Abstract][Full Text] [Related]
4. Reagent for Evaluating Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS) Performance in Bottom-Up Proteomic Experiments.
Beri J; Rosenblatt MM; Strauss E; Urh M; Bereman MS
Anal Chem; 2015 Dec; 87(23):11635-40. PubMed ID: 26537636
[TBL] [Abstract][Full Text] [Related]
5. Performance metrics for evaluating system suitability in liquid chromatography--Mass spectrometry peptide mass mapping of protein therapeutics and monoclonal antibodies.
Zhou M; Gucinski AC; Boyne MT
MAbs; 2015; 7(6):1104-17. PubMed ID: 26218711
[TBL] [Abstract][Full Text] [Related]
6. An automated pipeline for high-throughput label-free quantitative proteomics.
Weisser H; Nahnsen S; Grossmann J; Nilse L; Quandt A; Brauer H; Sturm M; Kenar E; Kohlbacher O; Aebersold R; Malmström L
J Proteome Res; 2013 Apr; 12(4):1628-44. PubMed ID: 23391308
[TBL] [Abstract][Full Text] [Related]
7. LC-MS
Souza GHMF; Guest PC; Martins-de-Souza D
Methods Mol Biol; 2017; 1546():57-73. PubMed ID: 27896757
[TBL] [Abstract][Full Text] [Related]
8. APP: an Automated Proteomics Pipeline for the analysis of mass spectrometry data based on multiple open access tools.
Malm EK; Srivastava V; Sundqvist G; Bulone V
BMC Bioinformatics; 2014 Dec; 15(1):441. PubMed ID: 25547515
[TBL] [Abstract][Full Text] [Related]
9. Performance metrics for liquid chromatography-tandem mass spectrometry systems in proteomics analyses.
Rudnick PA; Clauser KR; Kilpatrick LE; Tchekhovskoi DV; Neta P; Blonder N; Billheimer DD; Blackman RK; Bunk DM; Cardasis HL; Ham AJ; Jaffe JD; Kinsinger CR; Mesri M; Neubert TA; Schilling B; Tabb DL; Tegeler TJ; Vega-Montoto L; Variyath AM; Wang M; Wang P; Whiteaker JR; Zimmerman LJ; Carr SA; Fisher SJ; Gibson BW; Paulovich AG; Regnier FE; Rodriguez H; Spiegelman C; Tempst P; Liebler DC; Stein SE
Mol Cell Proteomics; 2010 Feb; 9(2):225-41. PubMed ID: 19837981
[TBL] [Abstract][Full Text] [Related]
10. Comprehensive Evaluation and Optimization of the Data-Dependent LC-MS/MS Workflow for Deep Proteome Profiling.
Tang M; Huang P; Wu L; Zhou P; Gong P; Liu X; Wei Q; Hou X; Hu H; Zhang A; Shen C; Gao W; Tian R; Liu C
Anal Chem; 2023 May; 95(20):7897-7905. PubMed ID: 37164942
[TBL] [Abstract][Full Text] [Related]
11. QCMAP: An Interactive Web-Tool for Performance Diagnosis and Prediction of LC-MS Systems.
Kim T; Chen IR; Parker BL; Humphrey SJ; Crossett B; Cordwell SJ; Yang P; Yang JYH
Proteomics; 2019 Jul; 19(13):e1900068. PubMed ID: 31099962
[TBL] [Abstract][Full Text] [Related]
12. Statistical Assessment of QC Metrics on Raw LC-MS/MS Data.
Wang X
Methods Mol Biol; 2017; 1550():325-337. PubMed ID: 28188539
[TBL] [Abstract][Full Text] [Related]
13. Proteomics Quality Control: Quality Control Software for MaxQuant Results.
Bielow C; Mastrobuoni G; Kempa S
J Proteome Res; 2016 Mar; 15(3):777-87. PubMed ID: 26653327
[TBL] [Abstract][Full Text] [Related]
14. PASSEL: the PeptideAtlas SRMexperiment library.
Farrah T; Deutsch EW; Kreisberg R; Sun Z; Campbell DS; Mendoza L; Kusebauch U; Brusniak MY; Hüttenhain R; Schiess R; Selevsek N; Aebersold R; Moritz RL
Proteomics; 2012 Apr; 12(8):1170-5. PubMed ID: 22318887
[TBL] [Abstract][Full Text] [Related]
15. PROCAL: A Set of 40 Peptide Standards for Retention Time Indexing, Column Performance Monitoring, and Collision Energy Calibration.
Zolg DP; Wilhelm M; Yu P; Knaute T; Zerweck J; Wenschuh H; Reimer U; Schnatbaum K; Kuster B
Proteomics; 2017 Nov; 17(21):. PubMed ID: 28872757
[TBL] [Abstract][Full Text] [Related]
16. Determination of iohexol in human serum by a semi-automated liquid chromatography tandem mass spectrometry method.
Vicente FB; Vespa GK; Carrara F; Gaspari F; Haymond S
Clin Biochem; 2015 Jul; 48(10-11):679-85. PubMed ID: 25835151
[TBL] [Abstract][Full Text] [Related]
17. YPED: an integrated bioinformatics suite and database for mass spectrometry-based proteomics research.
Colangelo CM; Shifman M; Cheung KH; Stone KL; Carriero NJ; Gulcicek EE; Lam TT; Wu T; Bjornson RD; Bruce C; Nairn AC; Rinehart J; Miller PL; Williams KR
Genomics Proteomics Bioinformatics; 2015 Feb; 13(1):25-35. PubMed ID: 25712262
[TBL] [Abstract][Full Text] [Related]
18. Establishing Quality Control Procedures for Large-Scale Plasma Proteomics Analyses.
Patterson KL; Arul AB; Choi MJ; Oliver NC; Whitaker MD; Bodrick AC; Libby JB; Hansen S; Dumitrescu L; Gifford KA; Jefferson AL; Hohman TJ; Robinson RAS
J Am Soc Mass Spectrom; 2023 Jun; 34(6):1105-1116. PubMed ID: 37163770
[TBL] [Abstract][Full Text] [Related]
19. MZDASoft: a software architecture that enables large-scale comparison of protein expression levels over multiple samples based on liquid chromatography/tandem mass spectrometry.
Ghanat Bari M; Ramirez N; Wang Z; Zhang JM
Rapid Commun Mass Spectrom; 2015 Oct; 29(19):1841-8. PubMed ID: 26331936
[TBL] [Abstract][Full Text] [Related]
20. Immunosuppressant therapeutic drug monitoring by LC-MS/MS: workflow optimization through automated processing of whole blood samples.
Marinova M; Artusi C; Brugnolo L; Antonelli G; Zaninotto M; Plebani M
Clin Biochem; 2013 Nov; 46(16-17):1723-7. PubMed ID: 24012696
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]