These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

196 related articles for article (PubMed ID: 27723976)

  • 1. Mechanism of Facilitated Diffusion during a DNA Search in Crowded Environments.
    Krepel D; Gomez D; Klumpp S; Levy Y
    J Phys Chem B; 2016 Nov; 120(43):11113-11122. PubMed ID: 27723976
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Molecular crowding effect on dynamics of DNA-binding proteins search for their targets.
    Liu L; Luo K
    J Chem Phys; 2014 Dec; 141(22):225102. PubMed ID: 25494769
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Searching target sites on DNA by proteins: Role of DNA dynamics under confinement.
    Mondal A; Bhattacherjee A
    Nucleic Acids Res; 2015 Oct; 43(19):9176-86. PubMed ID: 26400158
    [TBL] [Abstract][Full Text] [Related]  

  • 4. How nonspecifically DNA-binding proteins search for the target in crowded environments.
    Ma Y; Chen Y; Yu W; Luo K
    J Chem Phys; 2016 Mar; 144(12):125102. PubMed ID: 27036479
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Sliding of proteins non-specifically bound to DNA: Brownian dynamics studies with coarse-grained protein and DNA models.
    Ando T; Skolnick J
    PLoS Comput Biol; 2014 Dec; 10(12):e1003990. PubMed ID: 25504215
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Structural Basis of Enhanced Facilitated Diffusion of DNA-Binding Protein in Crowded Cellular Milieu.
    Dey P; Bhattacherjee A
    Biophys J; 2020 Jan; 118(2):505-517. PubMed ID: 31862109
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Disparity in anomalous diffusion of proteins searching for their target DNA sites in a crowded medium is controlled by the size, shape and mobility of macromolecular crowders.
    Dey P; Bhattacherjee A
    Soft Matter; 2019 Feb; 15(9):1960-1969. PubMed ID: 30539954
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Understanding DNA interactions in crowded environments with a coarse-grained model.
    Hong F; Schreck JS; Šulc P
    Nucleic Acids Res; 2020 Nov; 48(19):10726-10738. PubMed ID: 33045749
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Modeling molecular interactions to understand spatial crowding effects on heterodimer formations.
    Puskar KM; Parisi-Amon A; Ta'asan S; Schwartz R; LeDuc PR
    Phys Rev E Stat Nonlin Soft Matter Phys; 2007 Oct; 76(4 Pt 1):041904. PubMed ID: 17995023
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Method for the analysis of contribution of sliding and hopping to a facilitated diffusion of DNA-binding protein: Application to in vivo data.
    Tabaka M; Burdzy K; Hołyst R
    Phys Rev E Stat Nonlin Soft Matter Phys; 2015 Aug; 92(2):022721. PubMed ID: 26382446
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Monte Carlo simulations of enzymatic reactions in crowded media. Effect of the enzyme-obstacle relative size.
    Pitulice L; Vilaseca E; Pastor I; Madurga S; Garcés JL; Isvoran A; Mas F
    Math Biosci; 2014 May; 251():72-82. PubMed ID: 24680707
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Intersegmental transfer of proteins between DNA regions in the presence of crowding.
    Krepel D; Levy Y
    Phys Chem Chem Phys; 2017 Nov; 19(45):30562-30569. PubMed ID: 29115315
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Diffusion of proteins in crowded solutions studied by docking-based modeling.
    Singh A; Kundrotas PJ; Vakser IA
    J Chem Phys; 2024 Sep; 161(9):. PubMed ID: 39225532
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Facilitated Diffusion of Transcription Factor Proteins with Anomalous Bulk Diffusion.
    Liu L; Cherstvy AG; Metzler R
    J Phys Chem B; 2017 Feb; 121(6):1284-1289. PubMed ID: 28107006
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Influence of Nonspecific Interactions between Proteins and
    Punia B; Chaudhury S
    J Phys Chem B; 2022 Apr; 126(16):3037-3047. PubMed ID: 35438996
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Mechanism of Facilitated Diffusion of DNA Repair Proteins in Crowded Environment: Case Study with Human Uracil DNA Glycosylase.
    Dey P; Bhattacherjee A
    J Phys Chem B; 2019 Dec; 123(49):10354-10364. PubMed ID: 31725289
    [TBL] [Abstract][Full Text] [Related]  

  • 17. New insights into diffusion in 3D crowded media by Monte Carlo simulations: effect of size, mobility and spatial distribution of obstacles.
    Vilaseca E; Isvoran A; Madurga S; Pastor I; Garcés JL; Mas F
    Phys Chem Chem Phys; 2011 Apr; 13(16):7396-407. PubMed ID: 21412541
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A Lattice-Boltzmann scheme for the simulation of diffusion in intracellular crowded systems.
    Angeles-Martinez L; Theodoropoulos C
    BMC Bioinformatics; 2015 Nov; 16():353. PubMed ID: 26530635
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Proteins searching for their target on DNA by one-dimensional diffusion: overcoming the "speed-stability" paradox.
    Yu S; Wang S; Larson RG
    J Biol Phys; 2013 Jun; 39(3):565-86. PubMed ID: 23860925
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Acceleration of bursty multiprotein target search kinetics on DNA by colocalisation.
    Kar P; Cherstvy AG; Metzler R
    Phys Chem Chem Phys; 2018 Mar; 20(12):7931-7946. PubMed ID: 29333542
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.