BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

338 related articles for article (PubMed ID: 27729530)

  • 1. Nascent RNA sequencing reveals distinct features in plant transcription.
    Hetzel J; Duttke SH; Benner C; Chory J
    Proc Natl Acad Sci U S A; 2016 Oct; 113(43):12316-12321. PubMed ID: 27729530
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Nascent transcription affected by RNA polymerase IV in Zea mays.
    Erhard KF; Talbot JE; Deans NC; McClish AE; Hollick JB
    Genetics; 2015 Apr; 199(4):1107-25. PubMed ID: 25653306
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Global Run-On Sequencing (GRO-Seq).
    Gardini A
    Methods Mol Biol; 2017; 1468():111-20. PubMed ID: 27662873
    [TBL] [Abstract][Full Text] [Related]  

  • 4. RNA polymerase II activity revealed by GRO-seq and pNET-seq in Arabidopsis.
    Zhu J; Liu M; Liu X; Dong Z
    Nat Plants; 2018 Dec; 4(12):1112-1123. PubMed ID: 30374093
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Comparative analysis of nascent RNA sequencing methods and their applications in studies of cotranscriptional splicing dynamics.
    Liu M; Zhu J; Huang H; Chen Y; Dong Z
    Plant Cell; 2023 Nov; 35(12):4304-4324. PubMed ID: 37708036
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination in Arabidopsis.
    Thomas QA; Ard R; Liu J; Li B; Wang J; Pelechano V; Marquardt S
    Nat Commun; 2020 May; 11(1):2589. PubMed ID: 32444691
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Global Run-on Sequencing (GRO-Seq).
    Tzerpos P; Daniel B; Nagy L
    Methods Mol Biol; 2021; 2351():25-39. PubMed ID: 34382182
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Nascent Transcript Sequencing for the Mapping of Promoters in Arabidopsis thaliana Mitochondria.
    Saleh O; Dwiani S; Rott J; Kühn K
    Methods Mol Biol; 2022; 2363():279-300. PubMed ID: 34545499
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Native elongation transcript sequencing reveals temperature dependent dynamics of nascent RNAPII transcription in Arabidopsis.
    Kindgren P; Ivanov M; Marquardt S
    Nucleic Acids Res; 2020 Mar; 48(5):2332-2347. PubMed ID: 31863587
    [TBL] [Abstract][Full Text] [Related]  

  • 10. GRO-seq, A Tool for Identification of Transcripts Regulating Gene Expression.
    Lopes R; Agami R; Korkmaz G
    Methods Mol Biol; 2017; 1543():45-55. PubMed ID: 28349421
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters.
    Core LJ; Waterfall JJ; Lis JT
    Science; 2008 Dec; 322(5909):1845-8. PubMed ID: 19056941
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identification of Arabidopsis genic and non-genic promoters by paired-end sequencing of TSS tags.
    Tokizawa M; Kusunoki K; Koyama H; Kurotani A; Sakurai T; Suzuki Y; Sakamoto T; Kurata T; Yamamoto YY
    Plant J; 2017 May; 90(3):587-605. PubMed ID: 28214361
    [TBL] [Abstract][Full Text] [Related]  

  • 13. An Annotation Agnostic Algorithm for Detecting Nascent RNA Transcripts in GRO-Seq.
    Azofeifa JG; Allen MA; Lladser ME; Dowell RD
    IEEE/ACM Trans Comput Biol Bioinform; 2017; 14(5):1070-1081. PubMed ID: 26829802
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Immediate transcriptional responses of Arabidopsis leaves to heat shock.
    Liu M; Zhu J; Dong Z
    J Integr Plant Biol; 2021 Mar; 63(3):468-483. PubMed ID: 32644278
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Enhancer occlusion transcripts regulate the activity of human enhancer domains via transcriptional interference: a computational perspective.
    Pande A; Makalowski W; Brosius J; Raabe CA
    Nucleic Acids Res; 2020 Apr; 48(7):3435-3454. PubMed ID: 32133533
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Distinct and concurrent pathways of Pol II- and Pol IV-dependent siRNA biogenesis at a repetitive trans-silencer locus in Arabidopsis thaliana.
    Sasaki T; Lee TF; Liao WW; Naumann U; Liao JL; Eun C; Huang YY; Fu JL; Chen PY; Meyers BC; Matzke AJ; Matzke M
    Plant J; 2014 Jul; 79(1):127-38. PubMed ID: 24798377
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Identifying transcription start sites and active enhancer elements using BruUV-seq.
    Magnuson B; Veloso A; Kirkconnell KS; de Andrade Lima LC; Paulsen MT; Ljungman EA; Bedi K; Prasad J; Wilson TE; Ljungman M
    Sci Rep; 2015 Dec; 5():17978. PubMed ID: 26656874
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Co-regulation of nuclear genes encoding plastid ribosomal proteins by light and plastid signals during seedling development in tobacco and Arabidopsis.
    Maclean D; Jerome CA; Brown AP; Gray JC
    Plant Mol Biol; 2008 Mar; 66(5):475-90. PubMed ID: 18193395
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress.
    Lee TA; Bailey-Serres J
    Plant Cell; 2019 Nov; 31(11):2573-2595. PubMed ID: 31519798
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Genome-Wide Identification of U-To-C RNA Editing Events for Nuclear Genes in
    Ruchika ; Okudaira C; Sakari M; Tsukahara T
    Cells; 2021 Mar; 10(3):. PubMed ID: 33809209
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.