218 related articles for article (PubMed ID: 27756200)
1. Roar: detecting alternative polyadenylation with standard mRNA sequencing libraries.
Grassi E; Mariella E; Lembo A; Molineris I; Provero P
BMC Bioinformatics; 2016 Oct; 17(1):423. PubMed ID: 27756200
[TBL] [Abstract][Full Text] [Related]
2. Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs.
Jan CH; Friedman RC; Ruby JG; Bartel DP
Nature; 2011 Jan; 469(7328):97-101. PubMed ID: 21085120
[TBL] [Abstract][Full Text] [Related]
3. Reprogramming of 3' untranslated regions of mRNAs by alternative polyadenylation in generation of pluripotent stem cells from different cell types.
Ji Z; Tian B
PLoS One; 2009 Dec; 4(12):e8419. PubMed ID: 20037631
[TBL] [Abstract][Full Text] [Related]
4. Differential genome-wide profiling of tandem 3' UTRs among human breast cancer and normal cells by high-throughput sequencing.
Fu Y; Sun Y; Li Y; Li J; Rao X; Chen C; Xu A
Genome Res; 2011 May; 21(5):741-7. PubMed ID: 21474764
[TBL] [Abstract][Full Text] [Related]
5. Alternative polyadenylation of single cells delineates cell types and serves as a prognostic marker in early stage breast cancer.
Kim N; Chung W; Eum HH; Lee HO; Park WY
PLoS One; 2019; 14(5):e0217196. PubMed ID: 31100099
[TBL] [Abstract][Full Text] [Related]
6. A global analysis of tandem 3'UTRs in eosinophilic chronic rhinosinusitis with nasal polyps.
Tian P; Sun Y; Li Y; Liu X; Wan L; Li J; Ma Y; Xu A; Fu Y; Zou H
PLoS One; 2012; 7(11):e48997. PubMed ID: 23185289
[TBL] [Abstract][Full Text] [Related]
7. APA-Scan: detection and visualization of 3'-UTR alternative polyadenylation with RNA-seq and 3'-end-seq data.
Fahmi NA; Ahmed KT; Chang JW; Nassereddeen H; Fan D; Yong J; Zhang W
BMC Bioinformatics; 2022 Sep; 23(Suppl 3):396. PubMed ID: 36171568
[TBL] [Abstract][Full Text] [Related]
8. Systematic profiling of poly(A)+ transcripts modulated by core 3' end processing and splicing factors reveals regulatory rules of alternative cleavage and polyadenylation.
Li W; You B; Hoque M; Zheng D; Luo W; Ji Z; Park JY; Gunderson SI; Kalsotra A; Manley JL; Tian B
PLoS Genet; 2015 Apr; 11(4):e1005166. PubMed ID: 25906188
[TBL] [Abstract][Full Text] [Related]
9. Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression.
Lianoglou S; Garg V; Yang JL; Leslie CS; Mayr C
Genes Dev; 2013 Nov; 27(21):2380-96. PubMed ID: 24145798
[TBL] [Abstract][Full Text] [Related]
10. The microRNA target site landscape is a novel molecular feature associating alternative polyadenylation with immune evasion activity in breast cancer.
Kim S; Bai Y; Fan Z; Diergaarde B; Tseng GC; Park HJ
Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32844230
[TBL] [Abstract][Full Text] [Related]
11. mountainClimber Identifies Alternative Transcription Start and Polyadenylation Sites in RNA-Seq.
Cass AA; Xiao X
Cell Syst; 2019 Oct; 9(4):393-400.e6. PubMed ID: 31542416
[TBL] [Abstract][Full Text] [Related]
12. Alternative polyadenylation analysis in animals and plants: newly developed strategies for profiling, processing and validation.
Zhang Y; Carrion SA; Zhang Y; Zhang X; Zinski AL; Michal JJ; Jiang Z
Int J Biol Sci; 2018; 14(12):1709-1714. PubMed ID: 30416385
[TBL] [Abstract][Full Text] [Related]
13. Widespread and extensive lengthening of 3' UTRs in the mammalian brain.
Miura P; Shenker S; Andreu-Agullo C; Westholm JO; Lai EC
Genome Res; 2013 May; 23(5):812-25. PubMed ID: 23520388
[TBL] [Abstract][Full Text] [Related]
14. Global estimation of the 3' untranslated region landscape using RNA sequencing.
Kim M; You BH; Nam JW
Methods; 2015 Jul; 83():111-7. PubMed ID: 25899044
[TBL] [Abstract][Full Text] [Related]
15. Recurrent tumor-specific regulation of alternative polyadenylation of cancer-related genes.
Xue Z; Warren RL; Gibb EA; MacMillan D; Wong J; Chiu R; Hammond SA; Yang C; Nip KM; Ennis CA; Hahn A; Reynolds S; Birol I
BMC Genomics; 2018 Jul; 19(1):536. PubMed ID: 30005633
[TBL] [Abstract][Full Text] [Related]
16. Genome-wide profiling reveals alternative polyadenylation of mRNA in human non-small cell lung cancer.
Zhang S; Zhang X; Lei W; Liang J; Xu Y; Liu H; Ma S
J Transl Med; 2019 Aug; 17(1):257. PubMed ID: 31391087
[TBL] [Abstract][Full Text] [Related]
17. Alternative polyadenylation produces multiple 3' untranslated regions of odorant receptor mRNAs in mouse olfactory sensory neurons.
Doulazmi M; Cros C; Dusart I; Trembleau A; Dubacq C
BMC Genomics; 2019 Jul; 20(1):577. PubMed ID: 31299892
[TBL] [Abstract][Full Text] [Related]
18. Context-specific regulation and function of mRNA alternative polyadenylation.
Mitschka S; Mayr C
Nat Rev Mol Cell Biol; 2022 Dec; 23(12):779-796. PubMed ID: 35798852
[TBL] [Abstract][Full Text] [Related]
19. Cell-type-specific analysis of alternative polyadenylation using single-cell transcriptomics data.
Shulman ED; Elkon R
Nucleic Acids Res; 2019 Nov; 47(19):10027-10039. PubMed ID: 31501864
[TBL] [Abstract][Full Text] [Related]
20. Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3'-UTR landscape across seven tumour types.
Xia Z; Donehower LA; Cooper TA; Neilson JR; Wheeler DA; Wagner EJ; Li W
Nat Commun; 2014 Nov; 5():5274. PubMed ID: 25409906
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
