180 related articles for article (PubMed ID: 27793280)
1. Precisely and Accurately Inferring Single-Molecule Rate Constants.
Kinz-Thompson CD; Bailey NA; Gonzalez RL
Methods Enzymol; 2016; 581():187-225. PubMed ID: 27793280
[TBL] [Abstract][Full Text] [Related]
2. Bayesian-Estimated Hierarchical HMMs Enable Robust Analysis of Single-Molecule Kinetic Heterogeneity.
Hon J; Gonzalez RL
Biophys J; 2019 May; 116(10):1790-1802. PubMed ID: 31010664
[TBL] [Abstract][Full Text] [Related]
3. Denoising single-molecule FRET trajectories with wavelets and Bayesian inference.
Taylor JN; Makarov DE; Landes CF
Biophys J; 2010 Jan; 98(1):164-73. PubMed ID: 20074517
[TBL] [Abstract][Full Text] [Related]
4. Analyzing Single Molecule FRET Trajectories Using HMM.
Okamoto K
Methods Mol Biol; 2017; 1552():103-113. PubMed ID: 28224493
[TBL] [Abstract][Full Text] [Related]
5. Observation and Analysis of RAD51 Nucleation Dynamics at Single-Monomer Resolution.
Subramanyam S; Kinz-Thompson CD; Gonzalez RL; Spies M
Methods Enzymol; 2018; 600():201-232. PubMed ID: 29458759
[TBL] [Abstract][Full Text] [Related]
6. DeepFRET, a software for rapid and automated single-molecule FRET data classification using deep learning.
Thomsen J; Sletfjerding MB; Jensen SB; Stella S; Paul B; Malle MG; Montoya G; Petersen TC; Hatzakis NS
Elife; 2020 Nov; 9():. PubMed ID: 33138911
[TBL] [Abstract][Full Text] [Related]
7. Dissection of Interaction Kinetics through Single-Molecule Interaction Simulation.
Pan M; Zhang Y; Yan G; Chen TY
Anal Chem; 2020 Sep; 92(17):11582-11589. PubMed ID: 32786469
[TBL] [Abstract][Full Text] [Related]
8. Variational Bayes analysis of a photon-based hidden Markov model for single-molecule FRET trajectories.
Okamoto K; Sako Y
Biophys J; 2012 Sep; 103(6):1315-24. PubMed ID: 22995504
[TBL] [Abstract][Full Text] [Related]
9. Putting Humpty-Dumpty Together: Clustering the Functional Dynamics of Single Biomolecular Machines Such as the Spliceosome.
Rohlman CE; Blanco MR; Walter NG
Methods Enzymol; 2016; 581():257-283. PubMed ID: 27793282
[TBL] [Abstract][Full Text] [Related]
10. Empirical Bayes methods enable advanced population-level analyses of single-molecule FRET experiments.
van de Meent JW; Bronson JE; Wiggins CH; Gonzalez RL
Biophys J; 2014 Mar; 106(6):1327-37. PubMed ID: 24655508
[TBL] [Abstract][Full Text] [Related]
11. State transition analysis of spontaneous branch migration of the Holliday junction by photon-based single-molecule fluorescence resonance energy transfer.
Okamoto K; Sako Y
Biophys Chem; 2016 Feb; 209():21-7. PubMed ID: 26687325
[TBL] [Abstract][Full Text] [Related]
12. Learning continuous potentials from smFRET.
Bryan JS; Pressé S
Biophys J; 2023 Jan; 122(2):433-441. PubMed ID: 36463404
[TBL] [Abstract][Full Text] [Related]
13. Increasing the Time Resolution of Single-Molecule Experiments with Bayesian Inference.
Kinz-Thompson CD; Gonzalez RL
Biophys J; 2018 Jan; 114(2):289-300. PubMed ID: 29401427
[TBL] [Abstract][Full Text] [Related]
14. Bayesian inference of accurate population sizes and FRET efficiencies from single diffusing biomolecules.
Murphy RR; Danezis G; Horrocks MH; Jackson SE; Klenerman D
Anal Chem; 2014 Sep; 86(17):8603-12. PubMed ID: 25105347
[TBL] [Abstract][Full Text] [Related]
15. Analysis of single-molecule FRET trajectories using hidden Markov modeling.
McKinney SA; Joo C; Ha T
Biophys J; 2006 Sep; 91(5):1941-51. PubMed ID: 16766620
[TBL] [Abstract][Full Text] [Related]
16. Determination of rate constants for conformational changes of RNA helicases by single-molecule FRET TIRF microscopy.
Chakraborty A; Krause L; Klostermeier D
Methods; 2022 Aug; 204():428-441. PubMed ID: 35304246
[TBL] [Abstract][Full Text] [Related]
17. A blind benchmark of analysis tools to infer kinetic rate constants from single-molecule FRET trajectories.
Götz M; Barth A; Bohr SS; Börner R; Chen J; Cordes T; Erie DA; Gebhardt C; Hadzic MCAS; Hamilton GL; Hatzakis NS; Hugel T; Kisley L; Lamb DC; de Lannoy C; Mahn C; Dunukara D; de Ridder D; Sanabria H; Schimpf J; Seidel CAM; Sigel RKO; Sletfjerding MB; Thomsen J; Vollmar L; Wanninger S; Weninger KR; Xu P; Schmid S
Nat Commun; 2022 Sep; 13(1):5402. PubMed ID: 36104339
[TBL] [Abstract][Full Text] [Related]
18. Analysis of the Diffusivity Change from Single-Molecule Trajectories on Living Cells.
Zhao R; Yuan J; Li N; Sun Y; Xia T; Fang X
Anal Chem; 2019 Nov; 91(21):13390-13397. PubMed ID: 31580655
[TBL] [Abstract][Full Text] [Related]
19. Graphical models for inferring single molecule dynamics.
Bronson JE; Hofman JM; Fei J; Gonzalez RL; Wiggins CH
BMC Bioinformatics; 2010 Oct; 11 Suppl 8(Suppl 8):S2. PubMed ID: 21034427
[TBL] [Abstract][Full Text] [Related]
20. Single-Molecule Kinetic Studies of Nucleic Acids by Förster Resonance Energy Transfer.
Hadzic MCAS; Sigel RKO; Börner R
Methods Mol Biol; 2022; 2439():173-190. PubMed ID: 35226322
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]