These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

167 related articles for article (PubMed ID: 27794557)

  • 1. FractBias: a graphical tool for assessing fractionation bias following polyploidy.
    Joyce BL; Haug-Baltzell A; Davey S; Bomhoff M; Schnable JC; Lyons E
    Bioinformatics; 2017 Feb; 33(4):552-554. PubMed ID: 27794557
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SynMap2 and SynMap3D: web-based whole-genome synteny browsers.
    Haug-Baltzell A; Stephens SA; Davey S; Scheidegger CE; Lyons E
    Bioinformatics; 2017 Jul; 33(14):2197-2198. PubMed ID: 28334338
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Navigating the CoGe Online Software Suite for Polyploidy Research.
    Albert VA; Krabbenhoft TJ
    Methods Mol Biol; 2023; 2545():19-45. PubMed ID: 36720806
    [TBL] [Abstract][Full Text] [Related]  

  • 4. EPIC-CoGe: managing and analyzing genomic data.
    Nelson ADL; Haug-Baltzell AK; Davey S; Gregory BD; Lyons E
    Bioinformatics; 2018 Aug; 34(15):2651-2653. PubMed ID: 29474529
    [TBL] [Abstract][Full Text] [Related]  

  • 5. gsrc: an R package for genome structure rearrangement calling.
    Grandke F; Snowdon R; Samans B
    Bioinformatics; 2017 Feb; 33(4):545-546. PubMed ID: 27797758
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Goldilocks: a tool for identifying genomic regions that are 'just right'.
    Nicholls SM; Clare A; Randall JC
    Bioinformatics; 2016 Jul; 32(13):2047-9. PubMed ID: 27153673
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Screening synteny blocks in pairwise genome comparisons through integer programming.
    Tang H; Lyons E; Pedersen B; Schnable JC; Paterson AH; Freeling M
    BMC Bioinformatics; 2011 Apr; 12():102. PubMed ID: 21501495
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SynFind: Compiling Syntenic Regions across Any Set of Genomes on Demand.
    Tang H; Bomhoff MD; Briones E; Zhang L; Schnable JC; Lyons E
    Genome Biol Evol; 2015 Nov; 7(12):3286-98. PubMed ID: 26560340
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Genome Context Viewer: visual exploration of multiple annotated genomes using microsynteny.
    Cleary A; Farmer A
    Bioinformatics; 2018 May; 34(9):1562-1564. PubMed ID: 29194466
    [TBL] [Abstract][Full Text] [Related]  

  • 10. CircosVCF: circos visualization of whole-genome sequence variations stored in VCF files.
    Drori E; Levy D; Smirin-Yosef P; Rahimi O; Salmon-Divon M
    Bioinformatics; 2017 May; 33(9):1392-1393. PubMed ID: 28453675
    [TBL] [Abstract][Full Text] [Related]  

  • 11. INTEGRATE-neo: a pipeline for personalized gene fusion neoantigen discovery.
    Zhang J; Mardis ER; Maher CA
    Bioinformatics; 2017 Feb; 33(4):555-557. PubMed ID: 27797777
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ASCIIGenome: a command line genome browser for console terminals.
    Beraldi D
    Bioinformatics; 2017 May; 33(10):1568-1569. PubMed ID: 28119307
    [TBL] [Abstract][Full Text] [Related]  

  • 13. GeneNoteBook, a collaborative notebook for comparative genomics.
    Holmer R; van Velzen R; Geurts R; Bisseling T; de Ridder D; Smit S
    Bioinformatics; 2019 Nov; 35(22):4779-4781. PubMed ID: 31199463
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CloudPhylo: a fast and scalable tool for phylogeny reconstruction.
    Xu X; Ji Z; Zhang Z
    Bioinformatics; 2017 Feb; 33(3):438-440. PubMed ID: 28172557
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Polyploidy and genome evolution in plants.
    Adams KL; Wendel JF
    Curr Opin Plant Biol; 2005 Apr; 8(2):135-41. PubMed ID: 15752992
    [TBL] [Abstract][Full Text] [Related]  

  • 16. genipe: an automated genome-wide imputation pipeline with automatic reporting and statistical tools.
    Lemieux Perreault LP; Legault MA; Asselin G; Dubé MP
    Bioinformatics; 2016 Dec; 32(23):3661-3663. PubMed ID: 27497439
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Krait: an ultrafast tool for genome-wide survey of microsatellites and primer design.
    Du L; Zhang C; Liu Q; Zhang X; Yue B; Hancock J
    Bioinformatics; 2018 Feb; 34(4):681-683. PubMed ID: 29048524
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Segway 2.0: Gaussian mixture models and minibatch training.
    Chan RCW; Libbrecht MW; Roberts EG; Bilmes JA; Noble WS; Hoffman MM
    Bioinformatics; 2018 Feb; 34(4):669-671. PubMed ID: 29028889
    [TBL] [Abstract][Full Text] [Related]  

  • 19. MulRF: a software package for phylogenetic analysis using multi-copy gene trees.
    Chaudhary R; Fernández-Baca D; Burleigh JG
    Bioinformatics; 2015 Feb; 31(3):432-3. PubMed ID: 25273112
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PERF: an exhaustive algorithm for ultra-fast and efficient identification of microsatellites from large DNA sequences.
    Avvaru AK; Sowpati DT; Mishra RK
    Bioinformatics; 2018 Mar; 34(6):943-948. PubMed ID: 29121165
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.