366 related articles for article (PubMed ID: 27821287)
1. Combination of RNA- and exome sequencing: Increasing specificity for identification of somatic point mutations and indels in acute leukaemia.
Hansen MC; Herborg LL; Hansen M; Roug AS; Hokland P
Leuk Res; 2016 Dec; 51():27-31. PubMed ID: 27821287
[TBL] [Abstract][Full Text] [Related]
2. Amplicon Indel Hunter Is a Novel Bioinformatics Tool to Detect Large Somatic Insertion/Deletion Mutations in Amplicon-Based Next-Generation Sequencing Data.
Kadri S; Zhen CJ; Wurst MN; Long BC; Jiang ZF; Wang YL; Furtado LV; Segal JP
J Mol Diagn; 2015 Nov; 17(6):635-43. PubMed ID: 26319364
[TBL] [Abstract][Full Text] [Related]
3. Optimized detection of insertions/deletions (INDELs) in whole-exome sequencing data.
Kim BY; Park JH; Jo HY; Koo SK; Park MH
PLoS One; 2017; 12(8):e0182272. PubMed ID: 28792971
[TBL] [Abstract][Full Text] [Related]
4. Practicability of detecting somatic point mutation from RNA high throughput sequencing data.
Sheng Q; Zhao S; Li CI; Shyr Y; Guo Y
Genomics; 2016 May; 107(5):163-9. PubMed ID: 27046520
[TBL] [Abstract][Full Text] [Related]
5. Evaluation of Nine Somatic Variant Callers for Detection of Somatic Mutations in Exome and Targeted Deep Sequencing Data.
Krøigård AB; Thomassen M; Lænkholm AV; Kruse TA; Larsen MJ
PLoS One; 2016; 11(3):e0151664. PubMed ID: 27002637
[TBL] [Abstract][Full Text] [Related]
6. Genomon ITDetector: a tool for somatic internal tandem duplication detection from cancer genome sequencing data.
Chiba K; Shiraishi Y; Nagata Y; Yoshida K; Imoto S; Ogawa S; Miyano S
Bioinformatics; 2015 Jan; 31(1):116-8. PubMed ID: 25192740
[TBL] [Abstract][Full Text] [Related]
7. Validation of the Oncomine
Williams HL; Walsh K; Diamond A; Oniscu A; Deans ZC
Virchows Arch; 2018 Oct; 473(4):489-503. PubMed ID: 30105577
[TBL] [Abstract][Full Text] [Related]
8. Clinical evaluation of panel testing by next-generation sequencing (NGS) for gene mutations in myeloid neoplasms.
Au CH; Wa A; Ho DN; Chan TL; Ma ES
Diagn Pathol; 2016 Jan; 11():11. PubMed ID: 26796102
[TBL] [Abstract][Full Text] [Related]
9. The distribution and mutagenesis of short coding INDELs from 1,128 whole exomes.
Challis D; Antunes L; Garrison E; Banks E; Evani US; Muzny D; Poplin R; Gibbs RA; Marth G; Yu F
BMC Genomics; 2015 Feb; 16(1):143. PubMed ID: 25765891
[TBL] [Abstract][Full Text] [Related]
10. Computational analysis in cancer exome sequencing.
Evans P; Kong Y; Krauthammer M
Methods Mol Biol; 2014; 1176():219-27. PubMed ID: 25030931
[TBL] [Abstract][Full Text] [Related]
11. Intersect-then-combine approach: improving the performance of somatic variant calling in whole exome sequencing data using multiple aligners and callers.
Callari M; Sammut SJ; De Mattos-Arruda L; Bruna A; Rueda OM; Chin SF; Caldas C
Genome Med; 2017 Apr; 9(1):35. PubMed ID: 28420412
[TBL] [Abstract][Full Text] [Related]
12. Exome versus transcriptome sequencing in identifying coding region variants.
Ku CS; Wu M; Cooper DN; Naidoo N; Pawitan Y; Pang B; Iacopetta B; Soong R
Expert Rev Mol Diagn; 2012 Apr; 12(3):241-51. PubMed ID: 22468815
[TBL] [Abstract][Full Text] [Related]
13. Whole-exome sequencing reveals the spectrum of gene mutations and the clonal evolution patterns in paediatric acute myeloid leukaemia.
Shiba N; Yoshida K; Shiraishi Y; Okuno Y; Yamato G; Hara Y; Nagata Y; Chiba K; Tanaka H; Terui K; Kato M; Park MJ; Ohki K; Shimada A; Takita J; Tomizawa D; Kudo K; Arakawa H; Adachi S; Taga T; Tawa A; Ito E; Horibe K; Sanada M; Miyano S; Ogawa S; Hayashi Y
Br J Haematol; 2016 Nov; 175(3):476-489. PubMed ID: 27470916
[TBL] [Abstract][Full Text] [Related]
14. Identification of somatic mutations using whole-exome sequencing in Korean patients with acute myeloid leukemia.
Heo SG; Koh Y; Kim JK; Jung J; Kim HL; Yoon SS; Park JW
BMC Med Genet; 2017 Mar; 18(1):23. PubMed ID: 28249600
[TBL] [Abstract][Full Text] [Related]
15. UMD-Predictor: A High-Throughput Sequencing Compliant System for Pathogenicity Prediction of any Human cDNA Substitution.
Salgado D; Desvignes JP; Rai G; Blanchard A; Miltgen M; Pinard A; Lévy N; Collod-Béroud G; Béroud C
Hum Mutat; 2016 May; 37(5):439-46. PubMed ID: 26842889
[TBL] [Abstract][Full Text] [Related]
16. mirTrios: an integrated pipeline for detection of de novo and rare inherited mutations from trios-based next-generation sequencing.
Li J; Jiang Y; Wang T; Chen H; Xie Q; Shao Q; Ran X; Xia K; Sun ZS; Wu J
J Med Genet; 2015 Apr; 52(4):275-81. PubMed ID: 25596308
[TBL] [Abstract][Full Text] [Related]
17. Identification of recurring tumor-specific somatic mutations in acute myeloid leukemia by transcriptome sequencing.
Greif PA; Eck SH; Konstandin NP; Benet-Pagès A; Ksienzyk B; Dufour A; Vetter AT; Popp HD; Lorenz-Depiereux B; Meitinger T; Bohlander SK; Strom TM
Leukemia; 2011 May; 25(5):821-7. PubMed ID: 21339757
[TBL] [Abstract][Full Text] [Related]
18. Indel detection from RNA-seq data: tool evaluation and strategies for accurate detection of actionable mutations.
Sun Z; Bhagwate A; Prodduturi N; Yang P; Kocher JA
Brief Bioinform; 2017 Nov; 18(6):973-983. PubMed ID: 27473065
[TBL] [Abstract][Full Text] [Related]
19. Evaluating somatic tumor mutation detection without matched normal samples.
Teer JK; Zhang Y; Chen L; Welsh EA; Cress WD; Eschrich SA; Berglund AE
Hum Genomics; 2017 Sep; 11(1):22. PubMed ID: 28870239
[TBL] [Abstract][Full Text] [Related]
20. Close correlation of copy number aberrations detected by next-generation sequencing with results from routine cytogenetics in acute myeloid leukemia.
Vosberg S; Herold T; Hartmann L; Neumann M; Opatz S; Metzeler KH; Schneider S; Graf A; Krebs S; Blum H; Baldus CD; Hiddemann W; Spiekermann K; Bohlander SK; Mansmann U; Greif PA
Genes Chromosomes Cancer; 2016 Jul; 55(7):553-67. PubMed ID: 27015608
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
