445 related articles for article (PubMed ID: 27832532)
21. Protocol for assay of transposase accessible chromatin sequencing in non-model species.
Kissane S; Dhandapani V; Orsini L
STAR Protoc; 2021 Mar; 2(1):100341. PubMed ID: 33659905
[TBL] [Abstract][Full Text] [Related]
22. methyl-ATAC-seq measures DNA methylation at accessible chromatin.
Spektor R; Tippens ND; Mimoso CA; Soloway PD
Genome Res; 2019 Jun; 29(6):969-977. PubMed ID: 31160376
[TBL] [Abstract][Full Text] [Related]
23. HMMRATAC: a Hidden Markov ModeleR for ATAC-seq.
Tarbell ED; Liu T
Nucleic Acids Res; 2019 Sep; 47(16):e91. PubMed ID: 31199868
[TBL] [Abstract][Full Text] [Related]
24. Assay for Transposase-Accessible Chromatin Using Sequencing of Freshly Isolated Muscle Stem Cells.
Yekelchyk M; Guenther S; Braun T
Methods Mol Biol; 2023; 2640():397-412. PubMed ID: 36995609
[TBL] [Abstract][Full Text] [Related]
25. Protocol for assaying chromatin accessibility using ATAC-seq in plants.
Wang FX; Shang GD; Wu LY; Mai YX; Gao J; Xu ZG; Wang JW
STAR Protoc; 2021 Mar; 2(1):100289. PubMed ID: 33532736
[TBL] [Abstract][Full Text] [Related]
26. ATAC-Seq for Assaying Chromatin Accessibility Protocol Using Echinoderm Embryos.
Magri MS; Voronov D; Ranđelović J; Cuomo C; Gómez-Skarmeta JL; Arnone MI
Methods Mol Biol; 2021; 2219():253-265. PubMed ID: 33074546
[TBL] [Abstract][Full Text] [Related]
27. Optimized assay for transposase-accessible chromatin by sequencing (ATAC-seq) library preparation from adult Drosophila melanogaster neurons.
Merrill CB; Pabon MA; Montgomery AB; Rodan AR; Rothenfluh A
Sci Rep; 2022 Apr; 12(1):6043. PubMed ID: 35411004
[TBL] [Abstract][Full Text] [Related]
28. DeNOPA: decoding nucleosome positions sensitively with sparse ATAC-seq data.
Xu B; Li X; Gao X; Jia Y; Liu J; Li F; Zhang Z
Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34875002
[TBL] [Abstract][Full Text] [Related]
29. Chromatin accessibility profiling by ATAC-seq.
Grandi FC; Modi H; Kampman L; Corces MR
Nat Protoc; 2022 Jun; 17(6):1518-1552. PubMed ID: 35478247
[TBL] [Abstract][Full Text] [Related]
30. Profiling Open Chromatin Structure in the Ovarian Somatic Cells Using ATAC-seq.
Murano K; Iwasaki YW; Siomi H
Methods Mol Biol; 2018; 1680():165-177. PubMed ID: 29030848
[TBL] [Abstract][Full Text] [Related]
31. Chromatin immunoprecipitation and an open chromatin assay in zebrafish erythrocytes.
Yang S; Ott CJ; Rossmann MP; Superdock M; Zon LI; Zhou Y
Methods Cell Biol; 2016; 135():387-412. PubMed ID: 27443937
[TBL] [Abstract][Full Text] [Related]
32. Analytical Approaches for ATAC-seq Data Analysis.
Smith JP; Sheffield NC
Curr Protoc Hum Genet; 2020 Jun; 106(1):e101. PubMed ID: 32543102
[TBL] [Abstract][Full Text] [Related]
33. Tn5 Transposase Applied in Genomics Research.
Li N; Jin K; Bai Y; Fu H; Liu L; Liu B
Int J Mol Sci; 2020 Nov; 21(21):. PubMed ID: 33172005
[TBL] [Abstract][Full Text] [Related]
34. Genome-Wide Mapping of Active Regulatory Elements Using ATAC-seq.
Marinov GK; Shipony Z; Kundaje A; Greenleaf WJ
Methods Mol Biol; 2023; 2611():3-19. PubMed ID: 36807060
[TBL] [Abstract][Full Text] [Related]
35. Assaying Chromatin Accessibility Using ATAC-Seq in Invertebrate Chordate Embryos.
Magri MS; Jiménez-Gancedo S; Bertrand S; Madgwick A; Escrivà H; Lemaire P; Gómez-Skarmeta JL
Front Cell Dev Biol; 2019; 7():372. PubMed ID: 32039199
[No Abstract] [Full Text] [Related]
36. Simultaneous Profiling of DNA Accessibility and Gene Expression Dynamics with ATAC-Seq and RNA-Seq.
Hendrickson DG; Soifer I; Wranik BJ; Botstein D; Scott McIsaac R
Methods Mol Biol; 2018; 1819():317-333. PubMed ID: 30421411
[TBL] [Abstract][Full Text] [Related]
37. ATAC-seq Optimization for Cancer Epigenetics Research.
Cooper M; Ray A; Bhattacharya A; Dhasarathy A; Takaku M
J Vis Exp; 2022 Jun; (184):. PubMed ID: 35848835
[TBL] [Abstract][Full Text] [Related]
38. The landscape of accessible chromatin in bovine oocytes and early embryos.
Ming H; Sun J; Pasquariello R; Gatenby L; Herrick JR; Yuan Y; Pinto CR; Bondioli KR; Krisher RL; Jiang Z
Epigenetics; 2021 Mar; 16(3):300-312. PubMed ID: 32663104
[TBL] [Abstract][Full Text] [Related]
39. ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing.
Chen X; Shen Y; Draper W; Buenrostro JD; Litzenburger U; Cho SW; Satpathy AT; Carter AC; Ghosh RP; East-Seletsky A; Doudna JA; Greenleaf WJ; Liphardt JT; Chang HY
Nat Methods; 2016 Dec; 13(12):1013-1020. PubMed ID: 27749837
[TBL] [Abstract][Full Text] [Related]
40. ATAC-pipe: general analysis of genome-wide chromatin accessibility.
Zuo Z; Jin Y; Zhang W; Lu Y; Li B; Qu K
Brief Bioinform; 2019 Sep; 20(5):1934-1943. PubMed ID: 29982337
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
