196 related articles for article (PubMed ID: 27843484)
1. Measures for interoperability of phenotypic data: minimum information requirements and formatting.
Ćwiek-Kupczyńska H; Altmann T; Arend D; Arnaud E; Chen D; Cornut G; Fiorani F; Frohmberg W; Junker A; Klukas C; Lange M; Mazurek C; Nafissi A; Neveu P; van Oeveren J; Pommier C; Poorter H; Rocca-Serra P; Sansone SA; Scholz U; van Schriek M; Seren Ü; Usadel B; Weise S; Kersey P; Krajewski P
Plant Methods; 2016; 12():44. PubMed ID: 27843484
[TBL] [Abstract][Full Text] [Related]
2. linkedISA: semantic representation of ISA-Tab experimental metadata.
González-Beltrán A; Maguire E; Sansone SA; Rocca-Serra P
BMC Bioinformatics; 2014; 15 Suppl 14(Suppl 14):S4. PubMed ID: 25472428
[TBL] [Abstract][Full Text] [Related]
3. isa4j: a scalable Java library for creating ISA-Tab metadata.
Psaroudakis D; Liu F; König P; Scholz U; Junker A; Lange M; Arend D
F1000Res; 2020; 9():. PubMed ID: 33728038
[TBL] [Abstract][Full Text] [Related]
4. Towards recommendations for metadata and data handling in plant phenotyping.
Krajewski P; Chen D; Ćwiek H; van Dijk AD; Fiorani F; Kersey P; Klukas C; Lange M; Markiewicz A; Nap JP; van Oeveren J; Pommier C; Scholz U; van Schriek M; Usadel B; Weise S
J Exp Bot; 2015 Sep; 66(18):5417-27. PubMed ID: 26044092
[TBL] [Abstract][Full Text] [Related]
5. ISA API: An open platform for interoperable life science experimental metadata.
Johnson D; Batista D; Cochrane K; Davey RP; Etuk A; Gonzalez-Beltran A; Haug K; Izzo M; Larralde M; Lawson TN; Minotto A; Moreno P; Nainala VC; O'Donovan C; Pireddu L; Roger P; Shaw F; Steinbeck C; Weber RJM; Sansone SA; Rocca-Serra P
Gigascience; 2021 Sep; 10(9):. PubMed ID: 34528664
[TBL] [Abstract][Full Text] [Related]
6. Applying FAIR Principles to Plant Phenotypic Data Management in GnpIS.
Pommier C; Michotey C; Cornut G; Roumet P; Duchêne E; Flores R; Lebreton A; Alaux M; Durand S; Kimmel E; Letellier T; Merceron G; Laine M; Guerche C; Loaec M; Steinbach D; Laporte MA; Arnaud E; Quesneville H; Adam-Blondon AF
Plant Phenomics; 2019; 2019():1671403. PubMed ID: 33313522
[TBL] [Abstract][Full Text] [Related]
7. Recommendations for the formatting of Variant Call Format (VCF) files to make plant genotyping data FAIR.
Beier S; Fiebig A; Pommier C; Liyanage I; Lange M; Kersey PJ; Weise S; Finkers R; Koylass B; Cezard T; Courtot M; Contreras-Moreira B; Naamati G; Dyer S; Scholz U
F1000Res; 2022; 11():. PubMed ID: 35811804
[TBL] [Abstract][Full Text] [Related]
8. Quantitative monitoring of Arabidopsis thaliana growth and development using high-throughput plant phenotyping.
Arend D; Lange M; Pape JM; Weigelt-Fischer K; Arana-Ceballos F; Mücke I; Klukas C; Altmann T; Scholz U; Junker A
Sci Data; 2016 Aug; 3():160055. PubMed ID: 27529152
[TBL] [Abstract][Full Text] [Related]
9. Recommendations for the FAIRification of genomic track metadata.
Gundersen S; Boddu S; Capella-Gutierrez S; Drabløs F; Fernández JM; Kompova R; Taylor K; Titov D; Zerbino D; Hovig E
F1000Res; 2021; 10():. PubMed ID: 34249331
[No Abstract] [Full Text] [Related]
10. ISA-TAB-Nano: a specification for sharing nanomaterial research data in spreadsheet-based format.
Thomas DG; Gaheen S; Harper SL; Fritts M; Klaessig F; Hahn-Dantona E; Paik D; Pan S; Stafford GA; Freund ET; Klemm JD; Baker NA
BMC Biotechnol; 2013 Jan; 13():2. PubMed ID: 23311978
[TBL] [Abstract][Full Text] [Related]
11. PhenoApp: A mobile tool for plant phenotyping to record field and greenhouse observations.
Röckel F; Schreiber T; Schüler D; Braun U; Krukenberg I; Schwander F; Peil A; Brandt C; Willner E; Gransow D; Scholz U; Kecke S; Maul E; Lange M; Töpfer R
F1000Res; 2022; 11():12. PubMed ID: 36636476
[TBL] [Abstract][Full Text] [Related]
12. The BMS-LM ontology for biomedical data reporting throughout the lifecycle of a research study: From data model to ontology.
Raboudi A; Allanic M; Balvay D; Hervé PY; Viel T; Yoganathan T; Certain A; Hilbey J; Charlet J; Durupt A; Boutinaud P; Eynard B; Tavitian B
J Biomed Inform; 2022 Mar; 127():104007. PubMed ID: 35124236
[TBL] [Abstract][Full Text] [Related]
13. Grapevine and Wine Metabolomics-Based Guidelines for FAIR Data and Metadata Management.
Savoi S; Arapitsas P; Duchêne É; Nikolantonaki M; Ontañón I; Carlin S; Schwander F; Gougeon RD; Ferreira ACS; Theodoridis G; Töpfer R; Vrhovsek U; Adam-Blondon AF; Pezzotti M; Mattivi F
Metabolites; 2021 Nov; 11(11):. PubMed ID: 34822415
[TBL] [Abstract][Full Text] [Related]
14. Enabling FAIR data in Earth and environmental science with community-centric (meta)data reporting formats.
Crystal-Ornelas R; Varadharajan C; O'Ryan D; Beilsmith K; Bond-Lamberty B; Boye K; Burrus M; Cholia S; Christianson DS; Crow M; Damerow J; Ely KS; Goldman AE; Heinz SL; Hendrix VC; Kakalia Z; Mathes K; O'Brien F; Pennington SC; Robles E; Rogers A; Simmonds M; Velliquette T; Weisenhorn P; Welch JN; Whitenack K; Agarwal DA
Sci Data; 2022 Nov; 9(1):700. PubMed ID: 36376356
[TBL] [Abstract][Full Text] [Related]
15. A Data Transformation Methodology to Create Findable, Accessible, Interoperable, and Reusable Health Data: Software Design, Development, and Evaluation Study.
Sinaci AA; Gencturk M; Teoman HA; Laleci Erturkmen GB; Alvarez-Romero C; Martinez-Garcia A; Poblador-Plou B; Carmona-Pírez J; Löbe M; Parra-Calderon CL
J Med Internet Res; 2023 Mar; 25():e42822. PubMed ID: 36884270
[TBL] [Abstract][Full Text] [Related]
16. The Risa R/Bioconductor package: integrative data analysis from experimental metadata and back again.
González-Beltrán A; Neumann S; Maguire E; Sansone SA; Rocca-Serra P
BMC Bioinformatics; 2014; 15 Suppl 1(Suppl 1):S11. PubMed ID: 24564732
[TBL] [Abstract][Full Text] [Related]
17. FAIR data sharing: The roles of common data elements and harmonization.
Kush RD; Warzel D; Kush MA; Sherman A; Navarro EA; Fitzmartin R; Pétavy F; Galvez J; Becnel LB; Zhou FL; Harmon N; Jauregui B; Jackson T; Hudson L
J Biomed Inform; 2020 Jul; 107():103421. PubMed ID: 32407878
[TBL] [Abstract][Full Text] [Related]
18. Challenges for FAIR-compliant description and comparison of crop phenotype data with standardized controlled vocabularies.
Andrés-Hernández L; Halimi RA; Mauleon R; Mayes S; Baten A; King GJ
Database (Oxford); 2021 May; 2021():. PubMed ID: 33991093
[TBL] [Abstract][Full Text] [Related]
19. Developing data interoperability using standards: A wheat community use case.
Dzale Yeumo E; Alaux M; Arnaud E; Aubin S; Baumann U; Buche P; Cooper L; Ćwiek-Kupczyńska H; Davey RP; Fulss RA; Jonquet C; Laporte MA; Larmande P; Pommier C; Protonotarios V; Reverte C; Shrestha R; Subirats I; Venkatesan A; Whan A; Quesneville H
F1000Res; 2017; 6():1843. PubMed ID: 29333241
[TBL] [Abstract][Full Text] [Related]
20. Ontology-Enriched Specifications Enabling Findable, Accessible, Interoperable, and Reusable Marine Metagenomic Datasets in Cyberinfrastructure Systems.
Blumberg KL; Ponsero AJ; Bomhoff M; Wood-Charlson EM; DeLong EF; Hurwitz BL
Front Microbiol; 2021; 12():765268. PubMed ID: 34956127
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]