395 related articles for article (PubMed ID: 27867070)
1. The Shh Topological Domain Facilitates the Action of Remote Enhancers by Reducing the Effects of Genomic Distances.
Symmons O; Pan L; Remeseiro S; Aktas T; Klein F; Huber W; Spitz F
Dev Cell; 2016 Dec; 39(5):529-543. PubMed ID: 27867070
[TBL] [Abstract][Full Text] [Related]
2. Mapping the Shh long-range regulatory domain.
Anderson E; Devenney PS; Hill RE; Lettice LA
Development; 2014 Oct; 141(20):3934-43. PubMed ID: 25252942
[TBL] [Abstract][Full Text] [Related]
3. Developmentally regulated
Williamson I; Kane L; Devenney PS; Flyamer IM; Anderson E; Kilanowski F; Hill RE; Bickmore WA; Lettice LA
Development; 2019 Sep; 146(19):. PubMed ID: 31511252
[TBL] [Abstract][Full Text] [Related]
4. Large scale genomic reorganization of topological domains at the HoxD locus.
Fabre PJ; Leleu M; Mormann BH; Lopez-Delisle L; Noordermeer D; Beccari L; Duboule D
Genome Biol; 2017 Aug; 18(1):149. PubMed ID: 28784160
[TBL] [Abstract][Full Text] [Related]
5. Shh and ZRS enhancer colocalisation is specific to the zone of polarising activity.
Williamson I; Lettice LA; Hill RE; Bickmore WA
Development; 2016 Aug; 143(16):2994-3001. PubMed ID: 27402708
[TBL] [Abstract][Full Text] [Related]
6. Contribution of transposable elements and distal enhancers to evolution of human-specific features of interphase chromatin architecture in embryonic stem cells.
Glinsky GV
Chromosome Res; 2018 Mar; 26(1-2):61-84. PubMed ID: 29335803
[TBL] [Abstract][Full Text] [Related]
7. Enhancer adoption caused by genomic insertion elicits interdigital
Mouri K; Sagai T; Maeno A; Amano T; Toyoda A; Shiroishi T
Proc Natl Acad Sci U S A; 2018 Jan; 115(5):1021-1026. PubMed ID: 29255029
[TBL] [Abstract][Full Text] [Related]
8. Enhancer-promoter interactions can form independently of genomic distance and be functional across TAD boundaries.
Balasubramanian D; Borges Pinto P; Grasso A; Vincent S; Tarayre H; Lajoignie D; Ghavi-Helm Y
Nucleic Acids Res; 2024 Feb; 52(4):1702-1719. PubMed ID: 38084924
[TBL] [Abstract][Full Text] [Related]
9. Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions.
Lupiáñez DG; Kraft K; Heinrich V; Krawitz P; Brancati F; Klopocki E; Horn D; Kayserili H; Opitz JM; Laxova R; Santos-Simarro F; Gilbert-Dussardier B; Wittler L; Borschiwer M; Haas SA; Osterwalder M; Franke M; Timmermann B; Hecht J; Spielmann M; Visel A; Mundlos S
Cell; 2015 May; 161(5):1012-1025. PubMed ID: 25959774
[TBL] [Abstract][Full Text] [Related]
10. Cohesin is required for long-range enhancer action at the Shh locus.
Kane L; Williamson I; Flyamer IM; Kumar Y; Hill RE; Lettice LA; Bickmore WA
Nat Struct Mol Biol; 2022 Sep; 29(9):891-897. PubMed ID: 36097291
[TBL] [Abstract][Full Text] [Related]
11. A functional screen for sonic hedgehog regulatory elements across a 1 Mb interval identifies long-range ventral forebrain enhancers.
Jeong Y; El-Jaick K; Roessler E; Muenke M; Epstein DJ
Development; 2006 Feb; 133(4):761-72. PubMed ID: 16407397
[TBL] [Abstract][Full Text] [Related]
12. Upstream Enhancer Elements of Shh Regulate Oral and Dental Patterning.
Seo H; Amano T; Seki R; Sagai T; Kim J; Cho SW; Shiroishi T
J Dent Res; 2018 Aug; 97(9):1055-1063. PubMed ID: 29481312
[TBL] [Abstract][Full Text] [Related]
13. Functional dissection of the Sox9-Kcnj2 locus identifies nonessential and instructive roles of TAD architecture.
Despang A; Schöpflin R; Franke M; Ali S; Jerković I; Paliou C; Chan WL; Timmermann B; Wittler L; Vingron M; Mundlos S; Ibrahim DM
Nat Genet; 2019 Aug; 51(8):1263-1271. PubMed ID: 31358994
[TBL] [Abstract][Full Text] [Related]
14. Preformed chromatin topology assists transcriptional robustness of
Paliou C; Guckelberger P; Schöpflin R; Heinrich V; Esposito A; Chiariello AM; Bianco S; Annunziatella C; Helmuth J; Haas S; Jerković I; Brieske N; Wittler L; Timmermann B; Nicodemi M; Vingron M; Mundlos S; Andrey G
Proc Natl Acad Sci U S A; 2019 Jun; 116(25):12390-12399. PubMed ID: 31147463
[TBL] [Abstract][Full Text] [Related]
15. Evolutionary stability of topologically associating domains is associated with conserved gene regulation.
Krefting J; Andrade-Navarro MA; Ibn-Salem J
BMC Biol; 2018 Aug; 16(1):87. PubMed ID: 30086749
[TBL] [Abstract][Full Text] [Related]
16. Chromosomal dynamics at the Shh locus: limb bud-specific differential regulation of competence and active transcription.
Amano T; Sagai T; Tanabe H; Mizushina Y; Nakazawa H; Shiroishi T
Dev Cell; 2009 Jan; 16(1):47-57. PubMed ID: 19097946
[TBL] [Abstract][Full Text] [Related]
17. Evolutionary comparison reveals that diverging CTCF sites are signatures of ancestral topological associating domains borders.
Gómez-Marín C; Tena JJ; Acemel RD; López-Mayorga M; Naranjo S; de la Calle-Mustienes E; Maeso I; Beccari L; Aneas I; Vielmas E; Bovolenta P; Nobrega MA; Carvajal J; Gómez-Skarmeta JL
Proc Natl Acad Sci U S A; 2015 Jun; 112(24):7542-7. PubMed ID: 26034287
[TBL] [Abstract][Full Text] [Related]
18. A cluster of three long-range enhancers directs regional Shh expression in the epithelial linings.
Sagai T; Amano T; Tamura M; Mizushina Y; Sumiyama K; Shiroishi T
Development; 2009 May; 136(10):1665-74. PubMed ID: 19369396
[TBL] [Abstract][Full Text] [Related]
19. Are TADs supercoiled?
Racko D; Benedetti F; Dorier J; Stasiak A
Nucleic Acids Res; 2019 Jan; 47(2):521-532. PubMed ID: 30395328
[TBL] [Abstract][Full Text] [Related]
20. Invariant TAD Boundaries Constrain Cell-Type-Specific Looping Interactions between Promoters and Distal Elements around the CFTR Locus.
Smith EM; Lajoie BR; Jain G; Dekker J
Am J Hum Genet; 2016 Jan; 98(1):185-201. PubMed ID: 26748519
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]