BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

203 related articles for article (PubMed ID: 27873244)

  • 1. Mining Bacterial Genomes for Secondary Metabolite Gene Clusters.
    Adamek M; Spohn M; Stegmann E; Ziemert N
    Methods Mol Biol; 2017; 1520():23-47. PubMed ID: 27873244
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters.
    Blin K; Pascal Andreu V; de Los Santos ELC; Del Carratore F; Lee SY; Medema MH; Weber T
    Nucleic Acids Res; 2019 Jan; 47(D1):D625-D630. PubMed ID: 30395294
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species.
    Adamek M; Alanjary M; Sales-Ortells H; Goodfellow M; Bull AT; Winkler A; Wibberg D; Kalinowski J; Ziemert N
    BMC Genomics; 2018 Jun; 19(1):426. PubMed ID: 29859036
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Recent development of antiSMASH and other computational approaches to mine secondary metabolite biosynthetic gene clusters.
    Blin K; Kim HU; Medema MH; Weber T
    Brief Bioinform; 2019 Jul; 20(4):1103-1113. PubMed ID: 29112695
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Functional Genome Mining for Metabolites Encoded by Large Gene Clusters through Heterologous Expression of a Whole-Genome Bacterial Artificial Chromosome Library in Streptomyces spp.
    Xu M; Wang Y; Zhao Z; Gao G; Huang SX; Kang Q; He X; Lin S; Pang X; Deng Z; Tao M
    Appl Environ Microbiol; 2016 Oct; 82(19):5795-805. PubMed ID: 27451447
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication.
    Theobald S; Vesth TC; Rendsvig JK; Nielsen KF; Riley R; de Abreu LM; Salamov A; Frisvad JC; Larsen TO; Andersen MR; Hoof JB
    Sci Rep; 2018 Dec; 8(1):17957. PubMed ID: 30560908
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters.
    Blin K; Medema MH; Kottmann R; Lee SY; Weber T
    Nucleic Acids Res; 2017 Jan; 45(D1):D555-D559. PubMed ID: 27924032
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-scale determination of 5´ and 3´ boundaries of RNA transcripts in Streptomyces genomes.
    Lee Y; Lee N; Hwang S; Kim W; Jeong Y; Cho S; Palsson BO; Cho BK
    Sci Data; 2020 Dec; 7(1):436. PubMed ID: 33319794
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The evolution of genome mining in microbes - a review.
    Ziemert N; Alanjary M; Weber T
    Nat Prod Rep; 2016 Aug; 33(8):988-1005. PubMed ID: 27272205
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Challenges in the Heterologous Production of Antibiotics in Streptomyces.
    Bekiesch P; Basitta P; Apel AK
    Arch Pharm (Weinheim); 2016 Aug; 349(8):594-601. PubMed ID: 27258165
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Recent development of computational resources for new antibiotics discovery.
    Kim HU; Blin K; Lee SY; Weber T
    Curr Opin Microbiol; 2017 Oct; 39():113-120. PubMed ID: 29156309
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Characterization and analysis of an industrial strain of Streptomyces bingchenggensis by genome sequencing and gene microarray.
    Wang XJ; Zhang B; Yan YJ; An J; Zhang J; Liu CX; Xiang WS
    Genome; 2013 Nov; 56(11):677-89. PubMed ID: 24299107
    [TBL] [Abstract][Full Text] [Related]  

  • 13. antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters.
    Weber T; Blin K; Duddela S; Krug D; Kim HU; Bruccoleri R; Lee SY; Fischbach MA; Müller R; Wohlleben W; Breitling R; Takano E; Medema MH
    Nucleic Acids Res; 2015 Jul; 43(W1):W237-43. PubMed ID: 25948579
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genetic manipulation of secondary metabolite biosynthesis for improved production in Streptomyces and other actinomycetes.
    Baltz RH
    J Ind Microbiol Biotechnol; 2016 Mar; 43(2-3):343-70. PubMed ID: 26364200
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Assembly and features of secondary metabolite biosynthetic gene clusters in Streptomyces ansochromogenes.
    Zhong X; Tian Y; Niu G; Tan H
    Sci China Life Sci; 2013 Jul; 56(7):609-18. PubMed ID: 23832250
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Detecting and prioritizing biosynthetic gene clusters for bioactive compounds in bacteria and fungi.
    Tran PN; Yen MR; Chiang CY; Lin HC; Chen PY
    Appl Microbiol Biotechnol; 2019 Apr; 103(8):3277-3287. PubMed ID: 30859257
    [TBL] [Abstract][Full Text] [Related]  

  • 17. FunARTS, the Fungal bioActive compound Resistant Target Seeker, an exploration engine for target-directed genome mining in fungi.
    Yılmaz TM; Mungan MD; Berasategui A; Ziemert N
    Nucleic Acids Res; 2023 Jul; 51(W1):W191-W197. PubMed ID: 37207330
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Thirty complete Streptomyces genome sequences for mining novel secondary metabolite biosynthetic gene clusters.
    Lee N; Kim W; Hwang S; Lee Y; Cho S; Palsson B; Cho BK
    Sci Data; 2020 Feb; 7(1):55. PubMed ID: 32054853
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Molecular networking and pattern-based genome mining improves discovery of biosynthetic gene clusters and their products from Salinispora species.
    Duncan KR; Crüsemann M; Lechner A; Sarkar A; Li J; Ziemert N; Wang M; Bandeira N; Moore BS; Dorrestein PC; Jensen PR
    Chem Biol; 2015 Apr; 22(4):460-471. PubMed ID: 25865308
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Transcriptome Analysis of Aspergillus flavus Reveals veA-Dependent Regulation of Secondary Metabolite Gene Clusters, Including the Novel Aflavarin Cluster.
    Cary JW; Han Z; Yin Y; Lohmar JM; Shantappa S; Harris-Coward PY; Mack B; Ehrlich KC; Wei Q; Arroyo-Manzanares N; Uka V; Vanhaecke L; Bhatnagar D; Yu J; Nierman WC; Johns MA; Sorensen D; Shen H; De Saeger S; Diana Di Mavungu J; Calvo AM
    Eukaryot Cell; 2015 Oct; 14(10):983-97. PubMed ID: 26209694
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.