BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

121 related articles for article (PubMed ID: 27896069)

  • 21. TransFlow: a modular framework for assembling and assessing accurate de novo transcriptomes in non-model organisms.
    Seoane P; Espigares M; Carmona R; Polonio Á; Quintana J; Cretazzo E; Bota J; Pérez-García A; Dios Alché J; Gómez L; Claros MG
    BMC Bioinformatics; 2018 Nov; 19(Suppl 14):416. PubMed ID: 30453874
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Assessing the feasibility of GS FLX Pyrosequencing for sequencing the Atlantic salmon genome.
    Quinn NL; Levenkova N; Chow W; Bouffard P; Boroevich KA; Knight JR; Jarvie TP; Lubieniecki KP; Desany BA; Koop BF; Harkins TT; Davidson WS
    BMC Genomics; 2008 Aug; 9():404. PubMed ID: 18755037
    [TBL] [Abstract][Full Text] [Related]  

  • 23. EST sequencing and gene expression profiling in Scutellaria baicalensis.
    Park NI; Choi IY; Choi BS; Kim YS; Lee MY; Park SU
    EXCLI J; 2014; 13():392-400. PubMed ID: 26417266
    [TBL] [Abstract][Full Text] [Related]  

  • 24. De novo transcriptome assembly for a non-model species, the blood-sucking bug Triatoma brasiliensis, a vector of Chagas disease.
    Marchant A; Mougel F; Almeida C; Jacquin-Joly E; Costa J; Harry M
    Genetica; 2015 Apr; 143(2):225-39. PubMed ID: 25233990
    [TBL] [Abstract][Full Text] [Related]  

  • 25. PARRoT- a homology-based strategy to quantify and compare RNA-sequencing from non-model organisms.
    Gan RC; Chen TW; Wu TH; Huang PJ; Lee CC; Yeh YM; Chiu CH; Huang HD; Tang P
    BMC Bioinformatics; 2016 Dec; 17(Suppl 19):513. PubMed ID: 28155708
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Dataset from de novo transcriptome assembly of
    Matra DD; Ritonga AW; Natawijaya A; Poerwanto R; Sobir ; Widodo WD; Inoue E
    Data Brief; 2019 Feb; 22():566-569. PubMed ID: 30627609
    [No Abstract]   [Full Text] [Related]  

  • 27. De novo assembly and annotation of the European abalone Haliotis tuberculata transcriptome.
    Harney E; Dubief B; Boudry P; Basuyaux O; Schilhabel MB; Huchette S; Paillard C; Nunes FLD
    Mar Genomics; 2016 Aug; 28():11-16. PubMed ID: 26971316
    [TBL] [Abstract][Full Text] [Related]  

  • 28. A pilot study for channel catfish whole genome sequencing and de novo assembly.
    Jiang Y; Lu J; Peatman E; Kucuktas H; Liu S; Wang S; Sun F; Liu Z
    BMC Genomics; 2011 Dec; 12():629. PubMed ID: 22192763
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools.
    Derakhshani H; Bernier SP; Marko VA; Surette MG
    BMC Genomics; 2020 Jul; 21(1):519. PubMed ID: 32727443
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Differential growth-related gene expression in abalone (Haliotis midae).
    van der Merwe M; Franchini P; Roodt-Wilding R
    Mar Biotechnol (NY); 2011 Dec; 13(6):1125-39. PubMed ID: 21533523
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Optimization of de novo transcriptome assembly from high-throughput short read sequencing data improves functional annotation for non-model organisms.
    Haznedaroglu BZ; Reeves D; Rismani-Yazdi H; Peccia J
    BMC Bioinformatics; 2012 Jul; 13():170. PubMed ID: 22808927
    [TBL] [Abstract][Full Text] [Related]  

  • 32. A high-quality annotated transcriptome of swine peripheral blood.
    Liu H; Smith TPL; Nonneman DJ; Dekkers JCM; Tuggle CK
    BMC Genomics; 2017 Jun; 18(1):479. PubMed ID: 28646867
    [TBL] [Abstract][Full Text] [Related]  

  • 33. RNA sequencing read depth requirement for optimal transcriptome coverage in Hevea brasiliensis.
    Chow KS; Ghazali AK; Hoh CC; Mohd-Zainuddin Z
    BMC Res Notes; 2014 Feb; 7():69. PubMed ID: 24484543
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Extending rnaSPAdes functionality for hybrid transcriptome assembly.
    Prjibelski AD; Puglia GD; Antipov D; Bushmanova E; Giordano D; Mikheenko A; Vitale D; Lapidus A
    BMC Bioinformatics; 2020 Jul; 21(Suppl 12):302. PubMed ID: 32703149
    [TBL] [Abstract][Full Text] [Related]  

  • 35. De novo assembly of the Indian blue peacock (Pavo cristatus) genome using Oxford Nanopore technology and Illumina sequencing.
    Dhar R; Seethy A; Pethusamy K; Singh S; Rohil V; Purkayastha K; Mukherjee I; Goswami S; Singh R; Raj A; Srivastava T; Acharya S; Rajashekhar B; Karmakar S
    Gigascience; 2019 May; 8(5):. PubMed ID: 31077316
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Comparing de novo assemblers for 454 transcriptome data.
    Kumar S; Blaxter ML
    BMC Genomics; 2010 Oct; 11():571. PubMed ID: 20950480
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Evaluating characteristics of de novo assembly software on 454 transcriptome data: a simulation approach.
    Mundry M; Bornberg-Bauer E; Sammeth M; Feulner PG
    PLoS One; 2012; 7(2):e31410. PubMed ID: 22384018
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Evaluation and Validation of Assembling Corrected PacBio Long Reads for Microbial Genome Completion via Hybrid Approaches.
    Lin HH; Liao YC
    PLoS One; 2015; 10(12):e0144305. PubMed ID: 26641475
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Dataset of de novo assembly and functional annotation of the transcriptome during germination and initial growth of seedlings of
    Castro JC; Maddox JD; Rodríguez HN; Castro CG; Imán-Correa SA; Cobos M; Paredes JD; Marapara JL; Braga J; Adrianzén PM
    Data Brief; 2020 Aug; 31():105834. PubMed ID: 32577459
    [No Abstract]   [Full Text] [Related]  

  • 40. A quantitative reference transcriptome for Nematostella vectensis early embryonic development: a pipeline for de novo assembly in emerging model systems.
    Tulin S; Aguiar D; Istrail S; Smith J
    Evodevo; 2013; 4():16. PubMed ID: 23731568
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.