130 related articles for article (PubMed ID: 27896721)
1. The Classification of Protein Domains.
Dawson N; Sillitoe I; Marsden RL; Orengo CA
Methods Mol Biol; 2017; 1525():137-164. PubMed ID: 27896721
[TBL] [Abstract][Full Text] [Related]
2. The classification of protein domains.
Marsden RL; Orengo CA
Methods Mol Biol; 2008; 453():123-46. PubMed ID: 18712300
[TBL] [Abstract][Full Text] [Related]
3. Protein families and their evolution-a structural perspective.
Orengo CA; Thornton JM
Annu Rev Biochem; 2005; 74():867-900. PubMed ID: 15954844
[TBL] [Abstract][Full Text] [Related]
4. Protein domain organisation: adding order.
Kummerfeld SK; Teichmann SA
BMC Bioinformatics; 2009 Jan; 10():39. PubMed ID: 19178743
[TBL] [Abstract][Full Text] [Related]
5. Automatic annotation of protein function based on family identification.
Abascal F; Valencia A
Proteins; 2003 Nov; 53(3):683-92. PubMed ID: 14579359
[TBL] [Abstract][Full Text] [Related]
6. Identification and distribution of protein families in 120 completed genomes using Gene3D.
Lee D; Grant A; Marsden RL; Orengo C
Proteins; 2005 May; 59(3):603-15. PubMed ID: 15768405
[TBL] [Abstract][Full Text] [Related]
7. Assessing annotation transfer for genomics: quantifying the relations between protein sequence, structure and function through traditional and probabilistic scores.
Wilson CA; Kreychman J; Gerstein M
J Mol Biol; 2000 Mar; 297(1):233-49. PubMed ID: 10704319
[TBL] [Abstract][Full Text] [Related]
8. Genome-wide survey of remote homologues for protein domain superfamilies of known structure reveals unequal distribution across structural classes.
Iyer MS; Joshi AG; Sowdhamini R
Mol Omics; 2018 Aug; 14(4):266-280. PubMed ID: 29971307
[TBL] [Abstract][Full Text] [Related]
9. ELISA: a unified, multidimensional view of the protein domain universe.
Shakhnovich BE; Harvey JM; Delisi C
Genome Inform; 2004; 15(1):213-20. PubMed ID: 15712123
[TBL] [Abstract][Full Text] [Related]
10. Protein function annotation using protein domain family resources.
Das S; Orengo CA
Methods; 2016 Jan; 93():24-34. PubMed ID: 26434392
[TBL] [Abstract][Full Text] [Related]
11. Protein domain architectures.
Mulder NJ
Methods Mol Biol; 2010; 609():83-95. PubMed ID: 20221914
[TBL] [Abstract][Full Text] [Related]
12. Classification of proteins with shared motifs and internal repeats in the ECOD database.
Schaeffer RD; Kinch LN; Liao Y; Grishin NV
Protein Sci; 2016 Jul; 25(7):1188-203. PubMed ID: 26833690
[TBL] [Abstract][Full Text] [Related]
13. Classification and Exploration of 3D Protein Domain Interactions Using Kbdock.
Ghoorah AW; Devignes MD; Smaïl-Tabbone M; Ritchie DW
Methods Mol Biol; 2016; 1415():91-105. PubMed ID: 27115629
[TBL] [Abstract][Full Text] [Related]
14. Deep Evolutionary History of the Phox and Bem1 (PB1) Domain Across Eukaryotes.
Mutte SK; Weijers D
Sci Rep; 2020 Mar; 10(1):3797. PubMed ID: 32123237
[TBL] [Abstract][Full Text] [Related]
15. Navigating Among Known Structures in Protein Space.
Narunsky A; Ben-Tal N; Kolodny R
Methods Mol Biol; 2019; 1851():233-249. PubMed ID: 30298400
[TBL] [Abstract][Full Text] [Related]
16. Structural classification of small, disulfide-rich protein domains.
Cheek S; Krishna SS; Grishin NV
J Mol Biol; 2006 May; 359(1):215-37. PubMed ID: 16618491
[TBL] [Abstract][Full Text] [Related]
17. Comparable contributions of structural-functional constraints and expression level to the rate of protein sequence evolution.
Wolf MY; Wolf YI; Koonin EV
Biol Direct; 2008 Oct; 3():40. PubMed ID: 18840284
[TBL] [Abstract][Full Text] [Related]
18. Survey of current protein family databases and their application in comparative, structural and functional genomics.
Redfern O; Grant A; Maibaum M; Orengo C
J Chromatogr B Analyt Technol Biomed Life Sci; 2005 Feb; 815(1-2):97-107. PubMed ID: 15652801
[TBL] [Abstract][Full Text] [Related]
19. Delineation of modular proteins: domain boundary prediction from sequence information.
Kong L; Ranganathan S
Brief Bioinform; 2004 Jun; 5(2):179-92. PubMed ID: 15260897
[TBL] [Abstract][Full Text] [Related]
20. Statistical analysis of genomic protein family and domain controlled annotations for functional investigation of classified gene lists.
Masseroli M; Bellistri E; Franceschini A; Pinciroli F
BMC Bioinformatics; 2007 Mar; 8 Suppl 1(Suppl 1):S14. PubMed ID: 17430558
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
