220 related articles for article (PubMed ID: 27899563)
1. ChimerDB 3.0: an enhanced database for fusion genes from cancer transcriptome and literature data mining.
Lee M; Lee K; Yu N; Jang I; Choi I; Kim P; Jang YE; Kim B; Kim S; Lee B; Kang J; Lee S
Nucleic Acids Res; 2017 Jan; 45(D1):D784-D789. PubMed ID: 27899563
[TBL] [Abstract][Full Text] [Related]
2. ChimerDB 4.0: an updated and expanded database of fusion genes.
Jang YE; Jang I; Kim S; Cho S; Kim D; Kim K; Kim J; Hwang J; Kim S; Kim J; Kang J; Lee B; Lee S
Nucleic Acids Res; 2020 Jan; 48(D1):D817-D824. PubMed ID: 31680157
[TBL] [Abstract][Full Text] [Related]
3. ChimerDB 2.0--a knowledgebase for fusion genes updated.
Kim P; Yoon S; Kim N; Lee S; Ko M; Lee H; Kang H; Kim J; Lee S
Nucleic Acids Res; 2010 Jan; 38(Database issue):D81-5. PubMed ID: 19906715
[TBL] [Abstract][Full Text] [Related]
4. ChimerDB--a knowledgebase for fusion sequences.
Kim N; Kim P; Nam S; Shin S; Lee S
Nucleic Acids Res; 2006 Jan; 34(Database issue):D21-4. PubMed ID: 16381848
[TBL] [Abstract][Full Text] [Related]
5. InFusion: Advancing Discovery of Fusion Genes and Chimeric Transcripts from Deep RNA-Sequencing Data.
Okonechnikov K; Imai-Matsushima A; Paul L; Seitz A; Meyer TF; Garcia-Alcalde F
PLoS One; 2016; 11(12):e0167417. PubMed ID: 27907167
[TBL] [Abstract][Full Text] [Related]
6. BBP: Brucella genome annotation with literature mining and curation.
Xiang Z; Zheng W; He Y
BMC Bioinformatics; 2006 Jul; 7():347. PubMed ID: 16842628
[TBL] [Abstract][Full Text] [Related]
7. FusionScan: accurate prediction of fusion genes from RNA-Seq data.
Kim P; Jang YE; Lee S
Genomics Inform; 2019 Sep; 17(3):e26. PubMed ID: 31610622
[TBL] [Abstract][Full Text] [Related]
8. UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses.
Chandrashekar DS; Bashel B; Balasubramanya SAH; Creighton CJ; Ponce-Rodriguez I; Chakravarthi BVSK; Varambally S
Neoplasia; 2017 Aug; 19(8):649-658. PubMed ID: 28732212
[TBL] [Abstract][Full Text] [Related]
9. ProtFus: A Comprehensive Method Characterizing Protein-Protein Interactions of Fusion Proteins.
Tagore S; Gorohovski A; Jensen LJ; Frenkel-Morgenstern M
PLoS Comput Biol; 2019 Aug; 15(8):e1007239. PubMed ID: 31437145
[TBL] [Abstract][Full Text] [Related]
10. AtCAST3.0 update: a web-based tool for analysis of transcriptome data by searching similarities in gene expression profiles.
Kakei Y; Shimada Y
Plant Cell Physiol; 2015 Jan; 56(1):e7. PubMed ID: 25505006
[TBL] [Abstract][Full Text] [Related]
11. ECGene: A Literature-Based Knowledgebase of Endometrial Cancer Genes.
Zhao M; Liu Y; O'Mara TA
Hum Mutat; 2016 Apr; 37(4):337-43. PubMed ID: 26699919
[TBL] [Abstract][Full Text] [Related]
12. Co-fuse: a new class discovery analysis tool to identify and prioritize recurrent fusion genes from RNA-sequencing data.
Paisitkriangkrai S; Quek K; Nievergall E; Jabbour A; Zannettino A; Kok CH
Mol Genet Genomics; 2018 Oct; 293(5):1217-1229. PubMed ID: 29882166
[TBL] [Abstract][Full Text] [Related]
13. TumorFusions: an integrative resource for cancer-associated transcript fusions.
Hu X; Wang Q; Tang M; Barthel F; Amin S; Yoshihara K; Lang FM; Martinez-Ledesma E; Lee SH; Zheng S; Verhaak RGW
Nucleic Acids Res; 2018 Jan; 46(D1):D1144-D1149. PubMed ID: 29099951
[TBL] [Abstract][Full Text] [Related]
14. A fast detection of fusion genes from paired-end RNA-seq data.
Vu TN; Deng W; Trac QT; Calza S; Hwang W; Pawitan Y
BMC Genomics; 2018 Nov; 19(1):786. PubMed ID: 30382840
[TBL] [Abstract][Full Text] [Related]
15. Gateways to the FANTOM5 promoter level mammalian expression atlas.
Lizio M; Harshbarger J; Shimoji H; Severin J; Kasukawa T; Sahin S; Abugessaisa I; Fukuda S; Hori F; Ishikawa-Kato S; Mungall CJ; Arner E; Baillie JK; Bertin N; Bono H; de Hoon M; Diehl AD; Dimont E; Freeman TC; Fujieda K; Hide W; Kaliyaperumal R; Katayama T; Lassmann T; Meehan TF; Nishikata K; Ono H; Rehli M; Sandelin A; Schultes EA; 't Hoen PA; Tatum Z; Thompson M; Toyoda T; Wright DW; Daub CO; Itoh M; Carninci P; Hayashizaki Y; Forrest AR; Kawaji H;
Genome Biol; 2015 Jan; 16(1):22. PubMed ID: 25723102
[TBL] [Abstract][Full Text] [Related]
16. A Practical Guide to The Cancer Genome Atlas (TCGA).
Wang Z; Jensen MA; Zenklusen JC
Methods Mol Biol; 2016; 1418():111-41. PubMed ID: 27008012
[TBL] [Abstract][Full Text] [Related]
17. PubMed-EX: a web browser extension to enhance PubMed search with text mining features.
Tsai RT; Dai HJ; Lai PT; Huang CH
Bioinformatics; 2009 Nov; 25(22):3031-2. PubMed ID: 19654114
[TBL] [Abstract][Full Text] [Related]
18. MILANO--custom annotation of microarray results using automatic literature searches.
Rubinstein R; Simon I
BMC Bioinformatics; 2005 Jan; 6():12. PubMed ID: 15661078
[TBL] [Abstract][Full Text] [Related]
19. MIDAS: Mining differentially activated subpaths of KEGG pathways from multi-class RNA-seq data.
Lee S; Park Y; Kim S
Methods; 2017 Jul; 124():13-24. PubMed ID: 28579402
[TBL] [Abstract][Full Text] [Related]
20. Cytogenetic Resources and Information.
De Braekeleer E; Huret JL; Mossafa H; Dessen P
Methods Mol Biol; 2017; 1541():311-331. PubMed ID: 27910033
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]