1374 related articles for article (PubMed ID: 27899595)
1. PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements.
Mi H; Huang X; Muruganujan A; Tang H; Mills C; Kang D; Thomas PD
Nucleic Acids Res; 2017 Jan; 45(D1):D183-D189. PubMed ID: 27899595
[TBL] [Abstract][Full Text] [Related]
2. PANTHER version 10: expanded protein families and functions, and analysis tools.
Mi H; Poudel S; Muruganujan A; Casagrande JT; Thomas PD
Nucleic Acids Res; 2016 Jan; 44(D1):D336-42. PubMed ID: 26578592
[TBL] [Abstract][Full Text] [Related]
3. PANTHER version 16: a revised family classification, tree-based classification tool, enhancer regions and extensive API.
Mi H; Ebert D; Muruganujan A; Mills C; Albou LP; Mushayamaha T; Thomas PD
Nucleic Acids Res; 2021 Jan; 49(D1):D394-D403. PubMed ID: 33290554
[TBL] [Abstract][Full Text] [Related]
4. PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools.
Mi H; Muruganujan A; Ebert D; Huang X; Thomas PD
Nucleic Acids Res; 2019 Jan; 47(D1):D419-D426. PubMed ID: 30407594
[TBL] [Abstract][Full Text] [Related]
5. Protocol Update for large-scale genome and gene function analysis with the PANTHER classification system (v.14.0).
Mi H; Muruganujan A; Huang X; Ebert D; Mills C; Guo X; Thomas PD
Nat Protoc; 2019 Mar; 14(3):703-721. PubMed ID: 30804569
[TBL] [Abstract][Full Text] [Related]
6. PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium.
Mi H; Dong Q; Muruganujan A; Gaudet P; Lewis S; Thomas PD
Nucleic Acids Res; 2010 Jan; 38(Database issue):D204-10. PubMed ID: 20015972
[TBL] [Abstract][Full Text] [Related]
7. PANTHER version 6: protein sequence and function evolution data with expanded representation of biological pathways.
Mi H; Guo N; Kejariwal A; Thomas PD
Nucleic Acids Res; 2007 Jan; 35(Database issue):D247-52. PubMed ID: 17130144
[TBL] [Abstract][Full Text] [Related]
8. Large-scale gene function analysis with the PANTHER classification system.
Mi H; Muruganujan A; Casagrande JT; Thomas PD
Nat Protoc; 2013 Aug; 8(8):1551-66. PubMed ID: 23868073
[TBL] [Abstract][Full Text] [Related]
9. PANTHER: Making genome-scale phylogenetics accessible to all.
Thomas PD; Ebert D; Muruganujan A; Mushayahama T; Albou LP; Mi H
Protein Sci; 2022 Jan; 31(1):8-22. PubMed ID: 34717010
[TBL] [Abstract][Full Text] [Related]
10. DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists.
Huang DW; Sherman BT; Tan Q; Kir J; Liu D; Bryant D; Guo Y; Stephens R; Baseler MW; Lane HC; Lempicki RA
Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W169-75. PubMed ID: 17576678
[TBL] [Abstract][Full Text] [Related]
11. PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees.
Mi H; Muruganujan A; Thomas PD
Nucleic Acids Res; 2013 Jan; 41(Database issue):D377-86. PubMed ID: 23193289
[TBL] [Abstract][Full Text] [Related]
12. Mouse Genome Database (MGD)-2017: community knowledge resource for the laboratory mouse.
Blake JA; Eppig JT; Kadin JA; Richardson JE; Smith CL; Bult CJ;
Nucleic Acids Res; 2017 Jan; 45(D1):D723-D729. PubMed ID: 27899570
[TBL] [Abstract][Full Text] [Related]
13. Expansion of the Gene Ontology knowledgebase and resources.
The Gene Ontology Consortium
Nucleic Acids Res; 2017 Jan; 45(D1):D331-D338. PubMed ID: 27899567
[TBL] [Abstract][Full Text] [Related]
14. Bovine Genome Database: Tools for Mining the Bos taurus Genome.
Hagen DE; Unni DR; Tayal A; Burns GW; Elsik CG
Methods Mol Biol; 2018; 1757():211-249. PubMed ID: 29761461
[TBL] [Abstract][Full Text] [Related]
15. Plant Reactome: a knowledgebase and resource for comparative pathway analysis.
Naithani S; Gupta P; Preece J; D'Eustachio P; Elser JL; Garg P; Dikeman DA; Kiff J; Cook J; Olson A; Wei S; Tello-Ruiz MK; Mundo AF; Munoz-Pomer A; Mohammed S; Cheng T; Bolton E; Papatheodorou I; Stein L; Ware D; Jaiswal P
Nucleic Acids Res; 2020 Jan; 48(D1):D1093-D1103. PubMed ID: 31680153
[TBL] [Abstract][Full Text] [Related]
16. Applications for protein sequence-function evolution data: mRNA/protein expression analysis and coding SNP scoring tools.
Thomas PD; Kejariwal A; Guo N; Mi H; Campbell MJ; Muruganujan A; Lazareva-Ulitsky B
Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W645-50. PubMed ID: 16912992
[TBL] [Abstract][Full Text] [Related]
17. GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data.
Araujo FA; Barh D; Silva A; Guimarães L; Ramos RTJ
Sci Rep; 2018 Jan; 8(1):1794. PubMed ID: 29379090
[TBL] [Abstract][Full Text] [Related]
18. TransportDB 2.0: a database for exploring membrane transporters in sequenced genomes from all domains of life.
Elbourne LD; Tetu SG; Hassan KA; Paulsen IT
Nucleic Acids Res; 2017 Jan; 45(D1):D320-D324. PubMed ID: 27899676
[TBL] [Abstract][Full Text] [Related]
19. Visual annotation display (VLAD): a tool for finding functional themes in lists of genes.
Richardson JE; Bult CJ
Mamm Genome; 2015 Oct; 26(9-10):567-73. PubMed ID: 26047590
[TBL] [Abstract][Full Text] [Related]
20. Hymenoptera Genome Database: Using HymenopteraMine to Enhance Genomic Studies of Hymenopteran Insects.
Elsik CG; Tayal A; Unni DR; Burns GW; Hagen DE
Methods Mol Biol; 2018; 1757():513-556. PubMed ID: 29761469
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]