These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

247 related articles for article (PubMed ID: 27914054)

  • 1. Computational Protein Design Through Grafting and Stabilization.
    Zhu C; Mowrey DD; Dokholyan NV
    Methods Mol Biol; 2017; 1529():227-241. PubMed ID: 27914054
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Applications of Normal Mode Analysis Methods in Computational Protein Design.
    Frappier V; Chartier M; Najmanovich R
    Methods Mol Biol; 2017; 1529():203-214. PubMed ID: 27914052
    [TBL] [Abstract][Full Text] [Related]  

  • 3. OSPREY Predicts Resistance Mutations Using Positive and Negative Computational Protein Design.
    Ojewole A; Lowegard A; Gainza P; Reeve SM; Georgiev I; Anderson AC; Donald BR
    Methods Mol Biol; 2017; 1529():291-306. PubMed ID: 27914058
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Modeling Binding Affinity of Pathological Mutations for Computational Protein Design.
    Romero-Durana M; Pallara C; Glaser F; Fernández-Recio J
    Methods Mol Biol; 2017; 1529():139-159. PubMed ID: 27914049
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Solubis: a webserver to reduce protein aggregation through mutation.
    Van Durme J; De Baets G; Van Der Kant R; Ramakers M; Ganesan A; Wilkinson H; Gallardo R; Rousseau F; Schymkowitz J
    Protein Eng Des Sel; 2016 Aug; 29(8):285-9. PubMed ID: 27284085
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Bioinformatics Tools and Resources for Analyzing Protein Structures.
    Paxman JJ; Heras B
    Methods Mol Biol; 2017; 1549():209-220. PubMed ID: 27975294
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The RCSB protein data bank: integrative view of protein, gene and 3D structural information.
    Rose PW; Prlić A; Altunkaya A; Bi C; Bradley AR; Christie CH; Costanzo LD; Duarte JM; Dutta S; Feng Z; Green RK; Goodsell DS; Hudson B; Kalro T; Lowe R; Peisach E; Randle C; Rose AS; Shao C; Tao YP; Valasatava Y; Voigt M; Westbrook JD; Woo J; Yang H; Young JY; Zardecki C; Berman HM; Burley SK
    Nucleic Acids Res; 2017 Jan; 45(D1):D271-D281. PubMed ID: 27794042
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.
    Azoitei ML; Ban YE; Julien JP; Bryson S; Schroeter A; Kalyuzhniy O; Porter JR; Adachi Y; Baker D; Pai EF; Schief WR
    J Mol Biol; 2012 Jan; 415(1):175-92. PubMed ID: 22061265
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Computational tools help improve protein stability but with a solubility tradeoff.
    Broom A; Jacobi Z; Trainor K; Meiering EM
    J Biol Chem; 2017 Sep; 292(35):14349-14361. PubMed ID: 28710274
    [TBL] [Abstract][Full Text] [Related]  

  • 10. EpiSweep: Computationally Driven Reengineering of Therapeutic Proteins to Reduce Immunogenicity While Maintaining Function.
    Choi Y; Verma D; Griswold KE; Bailey-Kellogg C
    Methods Mol Biol; 2017; 1529():375-398. PubMed ID: 27914063
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Computational Protein Design Under a Given Backbone Structure with the ABACUS Statistical Energy Function.
    Xiong P; Chen Q; Liu H
    Methods Mol Biol; 2017; 1529():217-226. PubMed ID: 27914053
    [TBL] [Abstract][Full Text] [Related]  

  • 12. BindML/BindML+: Detecting Protein-Protein Interaction Interface Propensity from Amino Acid Substitution Patterns.
    Wei Q; La D; Kihara D
    Methods Mol Biol; 2017; 1529():279-289. PubMed ID: 27914057
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Integration of Molecular Dynamics Based Predictions into the Optimization of De Novo Protein Designs: Limitations and Benefits.
    Carvalho HF; Barbosa AJ; Roque AC; Iranzo O; Branco RJ
    Methods Mol Biol; 2017; 1529():181-201. PubMed ID: 27914051
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Computational design of a leucine-rich repeat protein with a predefined geometry.
    Rämisch S; Weininger U; Martinsson J; Akke M; André I
    Proc Natl Acad Sci U S A; 2014 Dec; 111(50):17875-80. PubMed ID: 25427795
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Computational tools for designing and engineering biocatalysts.
    Damborsky J; Brezovsky J
    Curr Opin Chem Biol; 2009 Feb; 13(1):26-34. PubMed ID: 19297237
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Loop modelling 1.0.
    Shirvanizadeh N; Vriend G; Arab SS
    J Mol Graph Model; 2018 Sep; 84():64-68. PubMed ID: 29920424
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Evolution-Inspired Computational Design of Symmetric Proteins.
    Voet AR; Simoncini D; Tame JR; Zhang KY
    Methods Mol Biol; 2017; 1529():309-322. PubMed ID: 27914059
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details.
    Potapov V; Cohen M; Schreiber G
    Protein Eng Des Sel; 2009 Sep; 22(9):553-60. PubMed ID: 19561092
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Annotating Mutational Effects on Proteins and Protein Interactions: Designing Novel and Revisiting Existing Protocols.
    Li M; Goncearenco A; Panchenko AR
    Methods Mol Biol; 2017; 1550():235-260. PubMed ID: 28188534
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Computational protein design with backbone plasticity.
    MacDonald JT; Freemont PS
    Biochem Soc Trans; 2016 Oct; 44(5):1523-1529. PubMed ID: 27911735
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.