157 related articles for article (PubMed ID: 27927232)
1. Publication of nuclear magnetic resonance experimental data with semantic web technology and the application thereof to biomedical research of proteins.
Yokochi M; Kobayashi N; Ulrich EL; Kinjo AR; Iwata T; Ioannidis YE; Livny M; Markley JL; Nakamura H; Kojima C; Fujiwara T
J Biomed Semantics; 2016 May; 7(1):16. PubMed ID: 27927232
[TBL] [Abstract][Full Text] [Related]
2. BioMagResBank (BMRB) as a Resource for Structural Biology.
Romero PR; Kobayashi N; Wedell JR; Baskaran K; Iwata T; Yokochi M; Maziuk D; Yao H; Fujiwara T; Kurusu G; Ulrich EL; Hoch JC; Markley JL
Methods Mol Biol; 2020; 2112():187-218. PubMed ID: 32006287
[TBL] [Abstract][Full Text] [Related]
3. A fast and efficient python library for interfacing with the Biological Magnetic Resonance Data Bank.
Smelter A; Astra M; Moseley HN
BMC Bioinformatics; 2017 Mar; 18(1):175. PubMed ID: 28302053
[TBL] [Abstract][Full Text] [Related]
4. BioFed: federated query processing over life sciences linked open data.
Hasnain A; Mehmood Q; Sana E Zainab S; Saleem M; Warren C; Zehra D; Decker S; Rebholz-Schuhmann D
J Biomed Semantics; 2017 Mar; 8(1):13. PubMed ID: 28298238
[TBL] [Abstract][Full Text] [Related]
5. Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources.
Waagmeester A; Kutmon M; Riutta A; Miller R; Willighagen EL; Evelo CT; Pico AR
PLoS Comput Biol; 2016 Jun; 12(6):e1004989. PubMed ID: 27336457
[TBL] [Abstract][Full Text] [Related]
6. BioMagResBank.
Ulrich EL; Akutsu H; Doreleijers JF; Harano Y; Ioannidis YE; Lin J; Livny M; Mading S; Maziuk D; Miller Z; Nakatani E; Schulte CF; Tolmie DE; Kent Wenger R; Yao H; Markley JL
Nucleic Acids Res; 2008 Jan; 36(Database issue):D402-8. PubMed ID: 17984079
[TBL] [Abstract][Full Text] [Related]
7. cMapper: gene-centric connectivity mapper for EBI-RDF platform.
Shoaib M; Ansari AA; Ahn SM
Bioinformatics; 2017 Jan; 33(2):266-271. PubMed ID: 27667790
[TBL] [Abstract][Full Text] [Related]
8. FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation.
Bolleman JT; Mungall CJ; Strozzi F; Baran J; Dumontier M; Bonnal RJ; Buels R; Hoehndorf R; Fujisawa T; Katayama T; Cock PJ
J Biomed Semantics; 2016 Jun; 7():39. PubMed ID: 27296299
[TBL] [Abstract][Full Text] [Related]
9. IDSM ChemWebRDF: SPARQLing small-molecule datasets.
Galgonek J; Vondrášek J
J Cheminform; 2021 May; 13(1):38. PubMed ID: 33980298
[TBL] [Abstract][Full Text] [Related]
10. BioMagResBank database with sets of experimental NMR constraints corresponding to the structures of over 1400 biomolecules deposited in the Protein Data Bank.
Doreleijers JF; Mading S; Maziuk D; Sojourner K; Yin L; Zhu J; Markley JL; Ulrich EL
J Biomol NMR; 2003 Jun; 26(2):139-46. PubMed ID: 12766409
[TBL] [Abstract][Full Text] [Related]
11. BioMagResBank databases DOCR and FRED containing converted and filtered sets of experimental NMR restraints and coordinates from over 500 protein PDB structures.
Doreleijers JF; Nederveen AJ; Vranken W; Lin J; Bonvin AM; Kaptein R; Markley JL; Ulrich EL
J Biomol NMR; 2005 May; 32(1):1-12. PubMed ID: 16041478
[TBL] [Abstract][Full Text] [Related]
12. YeastHub: a semantic web use case for integrating data in the life sciences domain.
Cheung KH; Yip KY; Smith A; Deknikker R; Masiar A; Gerstein M
Bioinformatics; 2005 Jun; 21 Suppl 1():i85-96. PubMed ID: 15961502
[TBL] [Abstract][Full Text] [Related]
13. SPANG: a SPARQL client supporting generation and reuse of queries for distributed RDF databases.
Chiba H; Uchiyama I
BMC Bioinformatics; 2017 Feb; 18(1):93. PubMed ID: 28178937
[TBL] [Abstract][Full Text] [Related]
14. Clever generation of rich SPARQL queries from annotated relational schema: application to Semantic Web Service creation for biological databases.
Wollbrett J; Larmande P; de Lamotte F; Ruiz M
BMC Bioinformatics; 2013 Apr; 14():126. PubMed ID: 23586394
[TBL] [Abstract][Full Text] [Related]
15. An automated system designed for large scale NMR data deposition and annotation: application to over 600 assigned chemical shift data entries to the BioMagResBank from the Riken Structural Genomics/Proteomics Initiative internal database.
Kobayashi N; Harano Y; Tochio N; Nakatani E; Kigawa T; Yokoyama S; Mading S; Ulrich EL; Markley JL; Akutsu H; Fujiwara T
J Biomol NMR; 2012 Aug; 53(4):311-20. PubMed ID: 22689068
[TBL] [Abstract][Full Text] [Related]
16. SPINS: standardized protein NMR storage. A data dictionary and object-oriented relational database for archiving protein NMR spectra.
Baran MC; Moseley HN; Sahota G; Montelione GT
J Biomol NMR; 2002 Oct; 24(2):113-21. PubMed ID: 12495027
[TBL] [Abstract][Full Text] [Related]
17. AlzPharm: integration of neurodegeneration data using RDF.
Lam HY; Marenco L; Clark T; Gao Y; Kinoshita J; Shepherd G; Miller P; Wu E; Wong GT; Liu N; Crasto C; Morse T; Stephens S; Cheung KH
BMC Bioinformatics; 2007 May; 8 Suppl 3(Suppl 3):S4. PubMed ID: 17493287
[TBL] [Abstract][Full Text] [Related]
18. Enabling semantic queries across federated bioinformatics databases.
Sima AC; Mendes de Farias T; Zbinden E; Anisimova M; Gil M; Stockinger H; Stockinger K; Robinson-Rechavi M; Dessimoz C
Database (Oxford); 2019 Jan; 2019():. PubMed ID: 31697362
[TBL] [Abstract][Full Text] [Related]
19. Querying clinical data in HL7 RIM based relational model with morph-RDB.
Priyatna F; Alonso-Calvo R; Paraiso-Medina S; Corcho O
J Biomed Semantics; 2017 Oct; 8(1):49. PubMed ID: 28982381
[TBL] [Abstract][Full Text] [Related]
20. StarDOM: from STAR format to XML.
Linge JP; Nilges M; Ehrlich L
J Biomol NMR; 1999 Oct; 15(2):169-72. PubMed ID: 10905827
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
