380 related articles for article (PubMed ID: 27975222)
1. Modification Site Localization in Peptides.
Chalkley RJ
Adv Exp Med Biol; 2016; 919():243-247. PubMed ID: 27975222
[TBL] [Abstract][Full Text] [Related]
2. Database Search Engines: Paradigms, Challenges and Solutions.
Verheggen K; Martens L; Berven FS; Barsnes H; Vaudel M
Adv Exp Med Biol; 2016; 919():147-156. PubMed ID: 27975215
[TBL] [Abstract][Full Text] [Related]
3. Analysis of the resolution limitations of peptide identification algorithms.
Colaert N; Degroeve S; Helsens K; Martens L
J Proteome Res; 2011 Dec; 10(12):5555-61. PubMed ID: 21995378
[TBL] [Abstract][Full Text] [Related]
4. Tandem Mass Spectrum Sequencing: An Alternative to Database Search Engines in Shotgun Proteomics.
Muth T; Rapp E; Berven FS; Barsnes H; Vaudel M
Adv Exp Med Biol; 2016; 919():217-226. PubMed ID: 27975219
[TBL] [Abstract][Full Text] [Related]
5. Identification, Quantification, and Site Localization of Protein Posttranslational Modifications via Mass Spectrometry-Based Proteomics.
Ke M; Shen H; Wang L; Luo S; Lin L; Yang J; Tian R
Adv Exp Med Biol; 2016; 919():345-382. PubMed ID: 27975226
[TBL] [Abstract][Full Text] [Related]
6. In-depth analysis of protein inference algorithms using multiple search engines and well-defined metrics.
Audain E; Uszkoreit J; Sachsenberg T; Pfeuffer J; Liang X; Hermjakob H; Sanchez A; Eisenacher M; Reinert K; Tabb DL; Kohlbacher O; Perez-Riverol Y
J Proteomics; 2017 Jan; 150():170-182. PubMed ID: 27498275
[TBL] [Abstract][Full Text] [Related]
7. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
Matthiesen R; Trelle MB; Højrup P; Bunkenborg J; Jensen ON
J Proteome Res; 2005; 4(6):2338-47. PubMed ID: 16335983
[TBL] [Abstract][Full Text] [Related]
8. Useful Web Resources.
Bui A; Person MD
Adv Exp Med Biol; 2016; 919():249-253. PubMed ID: 27975223
[TBL] [Abstract][Full Text] [Related]
9. Mass Spectrometry-Based Protein Quantification.
Chen Y; Wang F; Xu F; Yang T
Adv Exp Med Biol; 2016; 919():255-279. PubMed ID: 27975224
[TBL] [Abstract][Full Text] [Related]
10. Bioinformatics Tools for Proteomics Data Interpretation.
Calderón-González KG; Hernández-Monge J; Herrera-Aguirre ME; Luna-Arias JP
Adv Exp Med Biol; 2016; 919():281-341. PubMed ID: 27975225
[TBL] [Abstract][Full Text] [Related]
11. Andromeda: a peptide search engine integrated into the MaxQuant environment.
Cox J; Neuhauser N; Michalski A; Scheltema RA; Olsen JV; Mann M
J Proteome Res; 2011 Apr; 10(4):1794-805. PubMed ID: 21254760
[TBL] [Abstract][Full Text] [Related]
12. Visualization, Inspection and Interpretation of Shotgun Proteomics Identification Results.
Lereim RR; Oveland E; Berven FS; Vaudel M; Barsnes H
Adv Exp Med Biol; 2016; 919():227-235. PubMed ID: 27975220
[TBL] [Abstract][Full Text] [Related]
13. Platforms and Pipelines for Proteomics Data Analysis and Management.
Codrea MC; Nahnsen S
Adv Exp Med Biol; 2016; 919():203-215. PubMed ID: 27975218
[TBL] [Abstract][Full Text] [Related]
14. Hunting for unexpected post-translational modifications by spectral library searching with tier-wise scoring.
Ma CW; Lam H
J Proteome Res; 2014 May; 13(5):2262-71. PubMed ID: 24661115
[TBL] [Abstract][Full Text] [Related]
15. Computational and Statistical Methods for High-Throughput Mass Spectrometry-Based PTM Analysis.
Schwämmle V; Vaudel M
Methods Mol Biol; 2017; 1558():437-458. PubMed ID: 28150251
[TBL] [Abstract][Full Text] [Related]
16. Protein Inference.
He Z; Huang T; Zhao C; Teng B
Adv Exp Med Biol; 2016; 919():237-242. PubMed ID: 27975221
[TBL] [Abstract][Full Text] [Related]
17. Data Analysis Strategies for Protein Modification Identification.
Fu Y
Methods Mol Biol; 2016; 1362():265-75. PubMed ID: 26519183
[TBL] [Abstract][Full Text] [Related]
18. Protein-Protein Interaction Detection Via Mass Spectrometry-Based Proteomics.
Turriziani B; von Kriegsheim A; Pennington SR
Adv Exp Med Biol; 2016; 919():383-396. PubMed ID: 27975227
[TBL] [Abstract][Full Text] [Related]
19. PTMiner: Localization and Quality Control of Protein Modifications Detected in an Open Search and Its Application to Comprehensive Post-translational Modification Characterization in Human Proteome.
An Z; Zhai L; Ying W; Qian X; Gong F; Tan M; Fu Y
Mol Cell Proteomics; 2019 Feb; 18(2):391-405. PubMed ID: 30420486
[TBL] [Abstract][Full Text] [Related]
20. Protein Identification from Tandem Mass Spectra by Database Searching.
Edwards NJ
Methods Mol Biol; 2017; 1558():357-380. PubMed ID: 28150247
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]