130 related articles for article (PubMed ID: 27978814)
1. SwitchFinder - a novel method and query facility for discovering dynamic gene expression patterns.
Bulashevska S; Priest C; Speicher D; Zimmermann J; Westermann F; Cremers AB
BMC Bioinformatics; 2016 Dec; 17(1):532. PubMed ID: 27978814
[TBL] [Abstract][Full Text] [Related]
2. Bayesian state space models for inferring and predicting temporal gene expression profiles.
Liang Y; Kelemen A
Biom J; 2007 Dec; 49(6):801-14. PubMed ID: 17638289
[TBL] [Abstract][Full Text] [Related]
3. Classifying short gene expression time-courses with Bayesian estimation of piecewise constant functions.
Hafemeister C; Costa IG; Schönhuth A; Schliep A
Bioinformatics; 2011 Apr; 27(7):946-52. PubMed ID: 21266444
[TBL] [Abstract][Full Text] [Related]
4. Improvements in the reconstruction of time-varying gene regulatory networks: dynamic programming and regularization by information sharing among genes.
Grzegorczyk M; Husmeier D
Bioinformatics; 2011 Mar; 27(5):693-9. PubMed ID: 21177328
[TBL] [Abstract][Full Text] [Related]
5. A Bayesian Change Point Model for Dynamic Alternative Transcription Start Site Usage During Cellular Differentiation.
Xia J; Li Y; Zhu H; Xue F; Shi F; Li N
J Comput Biol; 2024 May; 31(5):445-457. PubMed ID: 38752891
[No Abstract] [Full Text] [Related]
6. MARD: a new method to detect differential gene expression in treatment-control time courses.
Cheng C; Ma X; Yan X; Sun F; Li LM
Bioinformatics; 2006 Nov; 22(21):2650-7. PubMed ID: 16928738
[TBL] [Abstract][Full Text] [Related]
7. VMCMC: a graphical and statistical analysis tool for Markov chain Monte Carlo traces.
Ali RH; Bark M; Miró J; Muhammad SA; Sjöstrand J; Zubair SM; Abbas RM; Arvestad L
BMC Bioinformatics; 2017 Feb; 18(1):97. PubMed ID: 28187712
[TBL] [Abstract][Full Text] [Related]
8. Bayesian finite Markov mixture model for temporal multi-tissue polygenic patterns.
Liang Y; Kelemen A
Biom J; 2009 Feb; 51(1):56-69. PubMed ID: 19197952
[TBL] [Abstract][Full Text] [Related]
9. Quadratic regression analysis for gene discovery and pattern recognition for non-cyclic short time-course microarray experiments.
Liu H; Tarima S; Borders AS; Getchell TV; Getchell ML; Stromberg AJ
BMC Bioinformatics; 2005 Apr; 6():106. PubMed ID: 15850479
[TBL] [Abstract][Full Text] [Related]
10. Input estimation for drug discovery using optimal control and Markov chain Monte Carlo approaches.
Trägårdh M; Chappell MJ; Ahnmark A; Lindén D; Evans ND; Gennemark P
J Pharmacokinet Pharmacodyn; 2016 Apr; 43(2):207-21. PubMed ID: 26932466
[TBL] [Abstract][Full Text] [Related]
11. Dynamic covariation between gene expression and proteome characteristics.
Sharabiani MT; Siermala M; Lehtinen TO; Vihinen M
BMC Bioinformatics; 2005 Aug; 6():215. PubMed ID: 16131395
[TBL] [Abstract][Full Text] [Related]
12. A Bayesian connectivity-based approach to constructing probabilistic gene regulatory networks.
Zhou X; Wang X; Pal R; Ivanov I; Bittner M; Dougherty ER
Bioinformatics; 2004 Nov; 20(17):2918-27. PubMed ID: 15145802
[TBL] [Abstract][Full Text] [Related]
13. GeneNetFinder2: Improved Inference of Dynamic Gene Regulatory Relations with Multiple Regulators.
Han K; Lee J
IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(1):4-11. PubMed ID: 26886731
[TBL] [Abstract][Full Text] [Related]
14. Differential Gene Expression (DEX) and Alternative Splicing Events (ASE) for Temporal Dynamic Processes Using HMMs and Hierarchical Bayesian Modeling Approaches.
Oh S; Song S
Methods Mol Biol; 2017; 1552():165-176. PubMed ID: 28224498
[TBL] [Abstract][Full Text] [Related]
15. Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models.
Hirose O; Yoshida R; Imoto S; Yamaguchi R; Higuchi T; Charnock-Jones DS; Print C; Miyano S
Bioinformatics; 2008 Apr; 24(7):932-42. PubMed ID: 18292116
[TBL] [Abstract][Full Text] [Related]
16. Bayesian network reconstruction using systems genetics data: comparison of MCMC methods.
Tasaki S; Sauerwine B; Hoff B; Toyoshiba H; Gaiteri C; Chaibub Neto E
Genetics; 2015 Apr; 199(4):973-89. PubMed ID: 25631319
[TBL] [Abstract][Full Text] [Related]
17. Differential and trajectory methods for time course gene expression data.
Liang Y; Tayo B; Cai X; Kelemen A
Bioinformatics; 2005 Jul; 21(13):3009-16. PubMed ID: 15886280
[TBL] [Abstract][Full Text] [Related]
18. Application of dynamic topic models to toxicogenomics data.
Lee M; Liu Z; Huang R; Tong W
BMC Bioinformatics; 2016 Oct; 17(Suppl 13):368. PubMed ID: 27766956
[TBL] [Abstract][Full Text] [Related]
19. A non-homogeneous dynamic Bayesian network with sequentially coupled interaction parameters for applications in systems and synthetic biology.
Grzegorczyk M; Husmeier D
Stat Appl Genet Mol Biol; 2012 Jul; 11(4):. PubMed ID: 22850067
[TBL] [Abstract][Full Text] [Related]
20.
; ; . PubMed ID:
[No Abstract] [Full Text] [Related]
[Next] [New Search]
