BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

602 related articles for article (PubMed ID: 27993007)

  • 1. Van der Waals Perspective on Coarse-Graining: Progress toward Solving Representability and Transferability Problems.
    Dunn NJ; Foley TT; Noid WG
    Acc Chem Res; 2016 Dec; 49(12):2832-2840. PubMed ID: 27993007
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Bottom-up coarse-grained models that accurately describe the structure, pressure, and compressibility of molecular liquids.
    Dunn NJ; Noid WG
    J Chem Phys; 2015 Dec; 143(24):243148. PubMed ID: 26723633
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Bottom-up coarse-grained models with predictive accuracy and transferability for both structural and thermodynamic properties of heptane-toluene mixtures.
    Dunn NJ; Noid WG
    J Chem Phys; 2016 May; 144(20):204124. PubMed ID: 27250296
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Rigorous Progress in Coarse-Graining.
    Noid WG; Szukalo RJ; Kidder KM; Lesniewski MC
    Annu Rev Phys Chem; 2024 Jun; 75(1):21-45. PubMed ID: 38941523
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Perspective: Advances, Challenges, and Insight for Predictive Coarse-Grained Models.
    Noid WG
    J Phys Chem B; 2023 May; 127(19):4174-4207. PubMed ID: 37149781
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Relative entropy indicates an ideal concentration for structure-based coarse graining of binary mixtures.
    Rosenberger D; van der Vegt NFA
    Phys Rev E; 2019 May; 99(5-1):053308. PubMed ID: 31212527
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Accuracy, Transferability, and Efficiency of Coarse-Grained Models of Molecular Liquids.
    Guenza MG; Dinpajooh M; McCarty J; Lyubimov IY
    J Phys Chem B; 2018 Nov; 122(45):10257-10278. PubMed ID: 30153027
    [TBL] [Abstract][Full Text] [Related]  

  • 8. BOCS: Bottom-up Open-source Coarse-graining Software.
    Dunn NJH; Lebold KM; DeLyser MR; Rudzinski JF; Noid WG
    J Phys Chem B; 2018 Apr; 122(13):3363-3377. PubMed ID: 29227668
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Investigating the energetic and entropic components of effective potentials across a glass transition.
    Szukalo RJ; Noid WG
    J Phys Condens Matter; 2021 Feb; 33(15):. PubMed ID: 33498016
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The multiscale coarse-graining method: assessing its accuracy and introducing density dependent coarse-grain potentials.
    Izvekov S; Chung PW; Rice BM
    J Chem Phys; 2010 Aug; 133(6):064109. PubMed ID: 20707563
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Understanding Missing Entropy in Coarse-Grained Systems: Addressing Issues of Representability and Transferability.
    Jin J; Pak AJ; Voth GA
    J Phys Chem Lett; 2019 Aug; 10(16):4549-4557. PubMed ID: 31319036
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Representability problems for coarse-grained water potentials.
    Johnson ME; Head-Gordon T; Louis AA
    J Chem Phys; 2007 Apr; 126(14):144509. PubMed ID: 17444725
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Bottom-up coarse-grained models for external fields and interfaces.
    DeLyser M; Noid WG
    J Chem Phys; 2020 Dec; 153(22):224103. PubMed ID: 33317310
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A microcanonical approach to temperature-transferable coarse-grained models using the relative entropy.
    Pretti E; Shell MS
    J Chem Phys; 2021 Sep; 155(9):094102. PubMed ID: 34496595
    [TBL] [Abstract][Full Text] [Related]  

  • 15. On the representability problem and the physical meaning of coarse-grained models.
    Wagner JW; Dama JF; Durumeric AE; Voth GA
    J Chem Phys; 2016 Jul; 145(4):044108. PubMed ID: 27475349
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Phase Equilibria Modeling with Systematically Coarse-Grained Models-A Comparative Study on State Point Transferability.
    Deichmann G; Dallavalle M; Rosenberger D; van der Vegt NFA
    J Phys Chem B; 2019 Jan; 123(2):504-515. PubMed ID: 30565944
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Effective force coarse-graining.
    Wang Y; Noid WG; Liu P; Voth GA
    Phys Chem Chem Phys; 2009 Mar; 11(12):2002-15. PubMed ID: 19280011
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Representability and Transferability of Kirkwood-Buff Iterative Boltzmann Inversion Models for Multicomponent Aqueous Systems.
    Ganguly P; van der Vegt NF
    J Chem Theory Comput; 2013 Dec; 9(12):5247-56. PubMed ID: 26592264
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The impact of resolution upon entropy and information in coarse-grained models.
    Foley TT; Shell MS; Noid WG
    J Chem Phys; 2015 Dec; 143(24):243104. PubMed ID: 26723589
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Systematic study of temperature and density variations in effective potentials for coarse-grained models of molecular liquids.
    Lebold KM; Noid WG
    J Chem Phys; 2019 Jan; 150(1):014104. PubMed ID: 30621403
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 31.