234 related articles for article (PubMed ID: 27998938)
1. Agent-based re-engineering of ErbB signaling: a modeling pipeline for integrative systems biology.
Das AA; Ajayakumar Darsana T; Jacob E
Bioinformatics; 2017 Mar; 33(5):726-732. PubMed ID: 27998938
[TBL] [Abstract][Full Text] [Related]
2.
Das AA; Jacob E
J Biosci; 2018 Jun; 43(2):295-306. PubMed ID: 29872018
[TBL] [Abstract][Full Text] [Related]
3. A data integration approach for cell cycle analysis oriented to model simulation in systems biology.
Alfieri R; Merelli I; Mosca E; Milanesi L
BMC Syst Biol; 2007 Aug; 1():35. PubMed ID: 17678529
[TBL] [Abstract][Full Text] [Related]
4. An approach for optimally extending mathematical models of signaling networks using omics data.
Bianconi F; Patiti F; Baldelli E; Crino L; Valigi P
Annu Int Conf IEEE Eng Med Biol Soc; 2015; 2015():6501-4. PubMed ID: 26737782
[TBL] [Abstract][Full Text] [Related]
5. The virtual cell--a candidate co-ordinator for 'middle-out' modelling of biological systems.
Walker DC; Southgate J
Brief Bioinform; 2009 Jul; 10(4):450-61. PubMed ID: 19293250
[TBL] [Abstract][Full Text] [Related]
6. SysBioMed report: advancing systems biology for medical applications.
Wolkenhauer O; Fell D; De Meyts P; Blüthgen N; Herzel H; Le Novère N; Höfer T; Schürrle K; van Leeuwen I
IET Syst Biol; 2009 May; 3(3):131-6. PubMed ID: 19449974
[TBL] [Abstract][Full Text] [Related]
7. ELECANS--an integrated model development environment for multiscale cancer systems biology.
Chaudhary SU; Shin SY; Lee D; Song JH; Cho KH
Bioinformatics; 2013 Apr; 29(7):957-9. PubMed ID: 23390137
[TBL] [Abstract][Full Text] [Related]
8. Hybrid semi-parametric mathematical systems: bridging the gap between systems biology and process engineering.
Teixeira AP; Carinhas N; Dias JM; Cruz P; Alves PM; Carrondo MJ; Oliveira R
J Biotechnol; 2007 Dec; 132(4):418-25. PubMed ID: 17870200
[TBL] [Abstract][Full Text] [Related]
9. Advanced Boolean modeling of biological networks applied to systems pharmacology.
Irurzun-Arana I; Pastor JM; Trocóniz IF; Gómez-Mantilla JD
Bioinformatics; 2017 Apr; 33(7):1040-1048. PubMed ID: 28073755
[TBL] [Abstract][Full Text] [Related]
10. Multi-scale computational modeling of developmental biology.
Setty Y
Bioinformatics; 2012 Aug; 28(15):2022-8. PubMed ID: 22628522
[TBL] [Abstract][Full Text] [Related]
11. Toward computational systems biology.
You L
Cell Biochem Biophys; 2004; 40(2):167-84. PubMed ID: 15054221
[TBL] [Abstract][Full Text] [Related]
12. Computational modeling of the EGF-receptor system: a paradigm for systems biology.
Wiley HS; Shvartsman SY; Lauffenburger DA
Trends Cell Biol; 2003 Jan; 13(1):43-50. PubMed ID: 12480339
[TBL] [Abstract][Full Text] [Related]
13. Parameter estimation using Simulated Annealing for S-system models of biochemical networks.
Gonzalez OR; Küper C; Jung K; Naval PC; Mendoza E
Bioinformatics; 2007 Feb; 23(4):480-6. PubMed ID: 17038344
[TBL] [Abstract][Full Text] [Related]
14. A model of TLR4 signaling and tolerance using a qualitative, particle-event-based method: introduction of spatially configured stochastic reaction chambers (SCSRC).
An G
Math Biosci; 2009 Jan; 217(1):43-52. PubMed ID: 18950646
[TBL] [Abstract][Full Text] [Related]
15. Modelling codependence in biological systems.
Mandel JJ; Palfreyman NM; Dubitzky W
IET Syst Biol; 2007 Jan; 1(1):18-32. PubMed ID: 17370426
[TBL] [Abstract][Full Text] [Related]
16. Reverse engineering of logic-based differential equation models using a mixed-integer dynamic optimization approach.
Henriques D; Rocha M; Saez-Rodriguez J; Banga JR
Bioinformatics; 2015 Sep; 31(18):2999-3007. PubMed ID: 26002881
[TBL] [Abstract][Full Text] [Related]
17. FALCON: a toolbox for the fast contextualization of logical networks.
De Landtsheer S; Trairatphisan P; Lucarelli P; Sauter T
Bioinformatics; 2017 Nov; 33(21):3431-3436. PubMed ID: 28673016
[TBL] [Abstract][Full Text] [Related]
18. SYCAMORE--a systems biology computational analysis and modeling research environment.
Weidemann A; Richter S; Stein M; Sahle S; Gauges R; Gabdoulline R; Surovtsova I; Semmelrock N; Besson B; Rojas I; Wade R; Kummer U
Bioinformatics; 2008 Jun; 24(12):1463-4. PubMed ID: 18463116
[TBL] [Abstract][Full Text] [Related]
19. Multi-scale modelling and simulation in systems biology.
Dada JO; Mendes P
Integr Biol (Camb); 2011 Feb; 3(2):86-96. PubMed ID: 21212881
[TBL] [Abstract][Full Text] [Related]
20. Computational systems biology and dose-response modeling in relation to new directions in toxicity testing.
Zhang Q; Bhattacharya S; Andersen ME; Conolly RB
J Toxicol Environ Health B Crit Rev; 2010 Feb; 13(2-4):253-76. PubMed ID: 20574901
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
