BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

229 related articles for article (PubMed ID: 28028549)

  • 1. SSUnique: Detecting Sequence Novelty in Microbiome Surveys.
    Lynch MD; Neufeld JD
    mSystems; 2016; 1(6):. PubMed ID: 28028549
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Targeted recovery of novel phylogenetic diversity from next-generation sequence data.
    Lynch MD; Bartram AK; Neufeld JD
    ISME J; 2012 Nov; 6(11):2067-77. PubMed ID: 22791239
    [TBL] [Abstract][Full Text] [Related]  

  • 3. TaxAss: Leveraging a Custom Freshwater Database Achieves Fine-Scale Taxonomic Resolution.
    Rohwer RR; Hamilton JJ; Newton RJ; McMahon KD
    mSphere; 2018 Sep; 3(5):. PubMed ID: 30185512
    [TBL] [Abstract][Full Text] [Related]  

  • 4. BEExact: a Metataxonomic Database Tool for High-Resolution Inference of Bee-Associated Microbial Communities.
    Daisley BA; Reid G
    mSystems; 2021 Apr; 6(2):. PubMed ID: 33824193
    [TBL] [Abstract][Full Text] [Related]  

  • 5. PanFP: pangenome-based functional profiles for microbial communities.
    Jun SR; Robeson MS; Hauser LJ; Schadt CW; Gorin AA
    BMC Res Notes; 2015 Sep; 8():479. PubMed ID: 26409790
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing.
    Huse SM; Dethlefsen L; Huber JA; Mark Welch D; Relman DA; Sogin ML
    PLoS Genet; 2008 Nov; 4(11):e1000255. PubMed ID: 19023400
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Rare unclassified 16S rRNA operational taxonomic units from the uncharted Engaño Bay (Argentinean Patagonia).
    Calvo AY; Manrique JM; Jones LR
    Can J Microbiol; 2018 Jan; 64(1):91-96. PubMed ID: 29078061
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Characterising the Canine Oral Microbiome by Direct Sequencing of Reverse-Transcribed rRNA Molecules.
    McDonald JE; Larsen N; Pennington A; Connolly J; Wallis C; Rooks DJ; Hall N; McCarthy AJ; Allison HE
    PLoS One; 2016; 11(6):e0157046. PubMed ID: 27276347
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Modified RNA-seq method for microbial community and diversity analysis using rRNA in different types of environmental samples.
    Yan YW; Zou B; Zhu T; Hozzein WN; Quan ZX
    PLoS One; 2017; 12(10):e0186161. PubMed ID: 29016661
    [TBL] [Abstract][Full Text] [Related]  

  • 10. phyloFlash: Rapid Small-Subunit rRNA Profiling and Targeted Assembly from Metagenomes.
    Gruber-Vodicka HR; Seah BKB; Pruesse E
    mSystems; 2020 Oct; 5(5):. PubMed ID: 33109753
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Phylogenetic affiliation of SSU rRNA genes generated by massively parallel sequencing: new insights into the freshwater protist diversity.
    Taib N; Mangot JF; Domaizon I; Bronner G; Debroas D
    PLoS One; 2013; 8(3):e58950. PubMed ID: 23516585
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evaluating and Improving Small Subunit rRNA PCR Primer Coverage for Bacteria, Archaea, and Eukaryotes Using Metagenomes from Global Ocean Surveys.
    McNichol J; Berube PM; Biller SJ; Fuhrman JA
    mSystems; 2021 Jun; 6(3):e0056521. PubMed ID: 34060911
    [TBL] [Abstract][Full Text] [Related]  

  • 13. AXIOME: automated exploration of microbial diversity.
    Lynch MDj; Masella AP; Hall MW; Bartram AK; Neufeld JD
    Gigascience; 2013 Mar; 2(1):3. PubMed ID: 23587322
    [TBL] [Abstract][Full Text] [Related]  

  • 14. PhylOTU: a high-throughput procedure quantifies microbial community diversity and resolves novel taxa from metagenomic data.
    Sharpton TJ; Riesenfeld SJ; Kembel SW; Ladau J; O'Dwyer JP; Green JL; Eisen JA; Pollard KS
    PLoS Comput Biol; 2011 Jan; 7(1):e1001061. PubMed ID: 21283775
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Status of the Archaeal and Bacterial Census: an Update.
    Schloss PD; Girard RA; Martin T; Edwards J; Thrash JC
    mBio; 2016 May; 7(3):. PubMed ID: 27190214
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Embracing Ambiguity in the Taxonomic Classification of Microbiome Sequencing Data.
    Shah N; Meisel JS; Pop M
    Front Genet; 2019; 10():1022. PubMed ID: 31681437
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Primer Design for an Accurate View of Picocyanobacterial Community Structure by Using High-Throughput Sequencing.
    Huber P; Cornejo-Castillo FM; Ferrera I; Sánchez P; Logares R; Metz S; Balagué V; Acinas SG; Gasol JM; Unrein F
    Appl Environ Microbiol; 2019 Apr; 85(7):. PubMed ID: 30709827
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Distribution and diversity of members of the bacterial phylum Fibrobacteres in environments where cellulose degradation occurs.
    Ransom-Jones E; Jones DL; Edwards A; McDonald JE
    Syst Appl Microbiol; 2014 Oct; 37(7):502-9. PubMed ID: 25154048
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Predicting the Presence and Abundance of Bacterial Taxa in Environmental Communities through Flow Cytometric Fingerprinting.
    Heyse J; Schattenberg F; Rubbens P; Müller S; Waegeman W; Boon N; Props R
    mSystems; 2021 Oct; 6(5):e0055121. PubMed ID: 34546074
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Retrieval of a million high-quality, full-length microbial 16S and 18S rRNA gene sequences without primer bias.
    Karst SM; Dueholm MS; McIlroy SJ; Kirkegaard RH; Nielsen PH; Albertsen M
    Nat Biotechnol; 2018 Feb; 36(2):190-195. PubMed ID: 29291348
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.