355 related articles for article (PubMed ID: 28045081)
1. Batch effects and the effective design of single-cell gene expression studies.
Tung PY; Blischak JD; Hsiao CJ; Knowles DA; Burnett JE; Pritchard JK; Gilad Y
Sci Rep; 2017 Jan; 7():39921. PubMed ID: 28045081
[TBL] [Abstract][Full Text] [Related]
2. Quantile normalization of single-cell RNA-seq read counts without unique molecular identifiers.
Townes FW; Irizarry RA
Genome Biol; 2020 Jul; 21(1):160. PubMed ID: 32620142
[TBL] [Abstract][Full Text] [Related]
3. Missing data and technical variability in single-cell RNA-sequencing experiments.
Hicks SC; Townes FW; Teng M; Irizarry RA
Biostatistics; 2018 Oct; 19(4):562-578. PubMed ID: 29121214
[TBL] [Abstract][Full Text] [Related]
4. Comparative Analysis of Single-Cell RNA Sequencing Methods.
Ziegenhain C; Vieth B; Parekh S; Reinius B; Guillaumet-Adkins A; Smets M; Leonhardt H; Heyn H; Hellmann I; Enard W
Mol Cell; 2017 Feb; 65(4):631-643.e4. PubMed ID: 28212749
[TBL] [Abstract][Full Text] [Related]
5. A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa.
Zhang H; Lee CAA; Li Z; Garbe JR; Eide CR; Petegrosso R; Kuang R; Tolar J
PLoS Comput Biol; 2018 Apr; 14(4):e1006053. PubMed ID: 29630593
[TBL] [Abstract][Full Text] [Related]
6. Detection of high variability in gene expression from single-cell RNA-seq profiling.
Chen HI; Jin Y; Huang Y; Chen Y
BMC Genomics; 2016 Aug; 17 Suppl 7(Suppl 7):508. PubMed ID: 27556924
[TBL] [Abstract][Full Text] [Related]
7. Detecting differential alternative splicing events in scRNA-seq with or without Unique Molecular Identifiers.
Hu Y; Wang K; Li M
PLoS Comput Biol; 2020 Jun; 16(6):e1007925. PubMed ID: 32502143
[TBL] [Abstract][Full Text] [Related]
8. A Single-Cell Sequencing Guide for Immunologists.
See P; Lum J; Chen J; Ginhoux F
Front Immunol; 2018; 9():2425. PubMed ID: 30405621
[TBL] [Abstract][Full Text] [Related]
9. Quality Control of Single-Cell RNA-seq.
Jiang P
Methods Mol Biol; 2019; 1935():1-9. PubMed ID: 30758816
[TBL] [Abstract][Full Text] [Related]
10. Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers.
Fu Y; Wu PH; Beane T; Zamore PD; Weng Z
BMC Genomics; 2018 Jul; 19(1):531. PubMed ID: 30001700
[TBL] [Abstract][Full Text] [Related]
11. Tools for the analysis of high-dimensional single-cell RNA sequencing data.
Wu Y; Zhang K
Nat Rev Nephrol; 2020 Jul; 16(7):408-421. PubMed ID: 32221477
[TBL] [Abstract][Full Text] [Related]
12. zUMIs - A fast and flexible pipeline to process RNA sequencing data with UMIs.
Parekh S; Ziegenhain C; Vieth B; Enard W; Hellmann I
Gigascience; 2018 Jun; 7(6):. PubMed ID: 29846586
[TBL] [Abstract][Full Text] [Related]
13. Gene expression distribution deconvolution in single-cell RNA sequencing.
Wang J; Huang M; Torre E; Dueck H; Shaffer S; Murray J; Raj A; Li M; Zhang NR
Proc Natl Acad Sci U S A; 2018 Jul; 115(28):E6437-E6446. PubMed ID: 29946020
[TBL] [Abstract][Full Text] [Related]
14. Gene length and detection bias in single cell RNA sequencing protocols.
Phipson B; Zappia L; Oshlack A
F1000Res; 2017; 6():595. PubMed ID: 28529717
[No Abstract] [Full Text] [Related]
15. Bioinformatics Analysis of Single-Cell RNA-Seq Raw Data from iPSC-Derived Neural Stem Cells.
Kim J; Daadi MM
Methods Mol Biol; 2019; 1919():145-159. PubMed ID: 30656627
[TBL] [Abstract][Full Text] [Related]
16. Single-Cell Library Preparation of iPSC-Derived Neural Stem Cells.
Kim J; Daadi MM
Methods Mol Biol; 2019; 1919():129-143. PubMed ID: 30656626
[TBL] [Abstract][Full Text] [Related]
17. Je, a versatile suite to handle multiplexed NGS libraries with unique molecular identifiers.
Girardot C; Scholtalbers J; Sauer S; Su SY; Furlong EE
BMC Bioinformatics; 2016 Oct; 17(1):419. PubMed ID: 27717304
[TBL] [Abstract][Full Text] [Related]
18. Single-cell Transcriptome Study as Big Data.
Yu P; Lin W
Genomics Proteomics Bioinformatics; 2016 Feb; 14(1):21-30. PubMed ID: 26876720
[TBL] [Abstract][Full Text] [Related]
19. A Novel Approach to Single Cell RNA-Sequence Analysis Facilitates In Silico Gene Reporting of Human Pluripotent Stem Cell-Derived Retinal Cell Types.
Phillips MJ; Jiang P; Howden S; Barney P; Min J; York NW; Chu LF; Capowski EE; Cash A; Jain S; Barlow K; Tabassum T; Stewart R; Pattnaik BR; Thomson JA; Gamm DM
Stem Cells; 2018 Mar; 36(3):313-324. PubMed ID: 29230913
[TBL] [Abstract][Full Text] [Related]
20. The effect of background noise and its removal on the analysis of single-cell expression data.
Janssen P; Kliesmete Z; Vieth B; Adiconis X; Simmons S; Marshall J; McCabe C; Heyn H; Levin JZ; Enard W; Hellmann I
Genome Biol; 2023 Jun; 24(1):140. PubMed ID: 37337297
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]