These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
143 related articles for article (PubMed ID: 28107006)
1. Facilitated Diffusion of Transcription Factor Proteins with Anomalous Bulk Diffusion. Liu L; Cherstvy AG; Metzler R J Phys Chem B; 2017 Feb; 121(6):1284-1289. PubMed ID: 28107006 [TBL] [Abstract][Full Text] [Related]
2. Molecular crowding effect on dynamics of DNA-binding proteins search for their targets. Liu L; Luo K J Chem Phys; 2014 Dec; 141(22):225102. PubMed ID: 25494769 [TBL] [Abstract][Full Text] [Related]
3. Disparity in anomalous diffusion of proteins searching for their target DNA sites in a crowded medium is controlled by the size, shape and mobility of macromolecular crowders. Dey P; Bhattacherjee A Soft Matter; 2019 Feb; 15(9):1960-1969. PubMed ID: 30539954 [TBL] [Abstract][Full Text] [Related]
4. Mechanism of Facilitated Diffusion during a DNA Search in Crowded Environments. Krepel D; Gomez D; Klumpp S; Levy Y J Phys Chem B; 2016 Nov; 120(43):11113-11122. PubMed ID: 27723976 [TBL] [Abstract][Full Text] [Related]
5. Transcription-factor binding and sliding on DNA studied using micro- and macroscopic models. Marklund EG; Mahmutovic A; Berg OG; Hammar P; van der Spoel D; Fange D; Elf J Proc Natl Acad Sci U S A; 2013 Dec; 110(49):19796-801. PubMed ID: 24222688 [TBL] [Abstract][Full Text] [Related]
6. Non-Brownian diffusion in lipid membranes: Experiments and simulations. Metzler R; Jeon JH; Cherstvy AG Biochim Biophys Acta; 2016 Oct; 1858(10):2451-2467. PubMed ID: 26826272 [TBL] [Abstract][Full Text] [Related]
7. Asymmetric DNA-search dynamics by symmetric dimeric proteins. Khazanov N; Marcovitz A; Levy Y Biochemistry; 2013 Aug; 52(32):5335-44. PubMed ID: 23866074 [TBL] [Abstract][Full Text] [Related]
8. Role of Macromolecular Crowding on the Intracellular Diffusion of DNA Binding Proteins. Dey P; Bhattacherjee A Sci Rep; 2018 Jan; 8(1):844. PubMed ID: 29339733 [TBL] [Abstract][Full Text] [Related]
9. Theoretical and computational modeling of target-site search kinetics in vitro and in vivo. Koslover EF; Díaz de la Rosa MA; Spakowitz AJ Biophys J; 2011 Aug; 101(4):856-65. PubMed ID: 21843476 [TBL] [Abstract][Full Text] [Related]
10. Sliding of proteins non-specifically bound to DNA: Brownian dynamics studies with coarse-grained protein and DNA models. Ando T; Skolnick J PLoS Comput Biol; 2014 Dec; 10(12):e1003990. PubMed ID: 25504215 [TBL] [Abstract][Full Text] [Related]
11. Method for the analysis of contribution of sliding and hopping to a facilitated diffusion of DNA-binding protein: Application to in vivo data. Tabaka M; Burdzy K; Hołyst R Phys Rev E Stat Nonlin Soft Matter Phys; 2015 Aug; 92(2):022721. PubMed ID: 26382446 [TBL] [Abstract][Full Text] [Related]
13. How motif environment influences transcription factor search dynamics: Finding a needle in a haystack. Dror I; Rohs R; Mandel-Gutfreund Y Bioessays; 2016 Jul; 38(7):605-12. PubMed ID: 27192961 [TBL] [Abstract][Full Text] [Related]
14. Diffusion, dimensionality, and noise in transcriptional regulation. Tkacik G; Bialek W Phys Rev E Stat Nonlin Soft Matter Phys; 2009 May; 79(5 Pt 1):051901. PubMed ID: 19518474 [TBL] [Abstract][Full Text] [Related]
15. Structure-Based Simulation and Sampling of Transcription Factor Protein Movements along DNA from Atomic-Scale Stepping to Coarse-Grained Diffusion. E C; Dai L; Tian J; Da LT; Yu J J Vis Exp; 2022 Mar; (181):. PubMed ID: 35311814 [TBL] [Abstract][Full Text] [Related]
16. Coarse-grained modeling of protein unspecifically bound to DNA. Guardiani C; Cencini M; Cecconi F Phys Biol; 2014 Apr; 11(2):026003. PubMed ID: 24685517 [TBL] [Abstract][Full Text] [Related]
17. Facilitated diffusion on confined DNA. Foffano G; Marenduzzo D; Orlandini E Phys Rev E Stat Nonlin Soft Matter Phys; 2012 Feb; 85(2 Pt 1):021919. PubMed ID: 22463256 [TBL] [Abstract][Full Text] [Related]
18. Sampling the cell with anomalous diffusion - the discovery of slowness. Guigas G; Weiss M Biophys J; 2008 Jan; 94(1):90-4. PubMed ID: 17827216 [TBL] [Abstract][Full Text] [Related]
19. Acceleration of bursty multiprotein target search kinetics on DNA by colocalisation. Kar P; Cherstvy AG; Metzler R Phys Chem Chem Phys; 2018 Mar; 20(12):7931-7946. PubMed ID: 29333542 [TBL] [Abstract][Full Text] [Related]
20. Revealing atomic-scale molecular diffusion of a plant-transcription factor WRKY domain protein along DNA. Dai L; Xu Y; Du Z; Su XD; Yu J Proc Natl Acad Sci U S A; 2021 Jun; 118(23):. PubMed ID: 34074787 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]