163 related articles for article (PubMed ID: 28113601)
1. Species Tree Inference from Gene Splits by Unrooted STAR Methods.
Allman ES; Degnan JH; Rhodes JA
IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(1):337-342. PubMed ID: 28113601
[TBL] [Abstract][Full Text] [Related]
2. Species tree inference by the STAR method and its generalizations.
Allman ES; Degnan JH; Rhodes JA
J Comput Biol; 2013 Jan; 20(1):50-61. PubMed ID: 23294273
[TBL] [Abstract][Full Text] [Related]
3. Anomalous unrooted gene trees.
Degnan JH
Syst Biol; 2013 Jul; 62(4):574-90. PubMed ID: 23576318
[TBL] [Abstract][Full Text] [Related]
4. QR-STAR: A Polynomial-Time Statistically Consistent Method for Rooting Species Trees Under the Coalescent.
Tabatabaee Y; Roch S; Warnow T
J Comput Biol; 2023 Nov; 30(11):1146-1181. PubMed ID: 37902986
[No Abstract] [Full Text] [Related]
5. Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent.
Allman ES; Degnan JH; Rhodes JA
J Math Biol; 2011 Jun; 62(6):833-62. PubMed ID: 20652704
[TBL] [Abstract][Full Text] [Related]
6. Estimating species trees from unrooted gene trees.
Liu L; Yu L
Syst Biol; 2011 Oct; 60(5):661-7. PubMed ID: 21447481
[TBL] [Abstract][Full Text] [Related]
7. Split Probabilities and Species Tree Inference Under the Multispecies Coalescent Model.
Allman ES; Degnan JH; Rhodes JA
Bull Math Biol; 2018 Jan; 80(1):64-103. PubMed ID: 29127546
[TBL] [Abstract][Full Text] [Related]
8. Statistical inconsistency of the unrooted minimize deep coalescence criterion.
Alanzi AAR; Degnan JH
PLoS One; 2021; 16(5):e0251107. PubMed ID: 33970931
[TBL] [Abstract][Full Text] [Related]
9. Consistency properties of species tree inference by minimizing deep coalescences.
Than CV; Rosenberg NA
J Comput Biol; 2011 Jan; 18(1):1-15. PubMed ID: 21210728
[TBL] [Abstract][Full Text] [Related]
10. Identifiability and Reconstructibility of Species Phylogenies Under a Modified Coalescent.
Long C; Kubatko L
Bull Math Biol; 2019 Feb; 81(2):408-430. PubMed ID: 29926380
[TBL] [Abstract][Full Text] [Related]
11. STELLS2: fast and accurate coalescent-based maximum likelihood inference of species trees from gene tree topologies.
Pei J; Wu Y
Bioinformatics; 2017 Jun; 33(12):1789-1797. PubMed ID: 28186220
[TBL] [Abstract][Full Text] [Related]
12. Heuristics for unrooted, unranked, and ranked anomaly zones under birth-death models.
Kim A; Degnan JH
Mol Phylogenet Evol; 2021 Aug; 161():107162. PubMed ID: 33831548
[TBL] [Abstract][Full Text] [Related]
13. Inferring rooted species trees from unrooted gene trees using approximate Bayesian computation.
Alanzi ARA; Degnan JH
Mol Phylogenet Evol; 2017 Nov; 116():13-24. PubMed ID: 28780022
[TBL] [Abstract][Full Text] [Related]
14. Fast and consistent estimation of species trees using supermatrix rooted triples.
DeGiorgio M; Degnan JH
Mol Biol Evol; 2010 Mar; 27(3):552-69. PubMed ID: 19833741
[TBL] [Abstract][Full Text] [Related]
15. A characterization of the set of species trees that produce anomalous ranked gene trees.
Degnan JH; Rosenberg NA; Stadler T
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(6):1558-68. PubMed ID: 22868677
[TBL] [Abstract][Full Text] [Related]
16. Discordance of species trees with their most likely gene trees.
Degnan JH; Rosenberg NA
PLoS Genet; 2006 May; 2(5):e68. PubMed ID: 16733550
[TBL] [Abstract][Full Text] [Related]
17. Species Tree Estimation Using ASTRAL: How Many Genes Are Enough?
Shekhar S; Roch S; Mirarab S
IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(5):1738-1747. PubMed ID: 28976320
[TBL] [Abstract][Full Text] [Related]
18. Estimating species phylogenies using coalescence times among sequences.
Liu L; Yu L; Pearl DK; Edwards SV
Syst Biol; 2009 Oct; 58(5):468-77. PubMed ID: 20525601
[TBL] [Abstract][Full Text] [Related]
19. Evaluating variations on the STAR algorithm for relative efficiency and sample sizes needed to reconstruct species trees.
Degnan JH
Pac Symp Biocomput; 2013; ():262-72. PubMed ID: 23424131
[TBL] [Abstract][Full Text] [Related]
20. Coalescent histories for caterpillar-like families.
Rosenberg NA
IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(5):1253-62. PubMed ID: 24524157
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]