These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

220 related articles for article (PubMed ID: 28117396)

  • 21. Comprehensive repertoire and phylogenetic analysis of the G protein-coupled receptors in human and mouse.
    Bjarnadóttir TK; Gloriam DE; Hellstrand SH; Kristiansson H; Fredriksson R; Schiöth HB
    Genomics; 2006 Sep; 88(3):263-73. PubMed ID: 16753280
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Improving Silkworm Genome Annotation Using a Proteogenomics Approach.
    Ye X; Tang X; Wang X; Che J; Wu M; Liang J; Ye L; Qian Q; Li J; You Z; Zhang Y; Wang S; Zhong B
    J Proteome Res; 2019 Aug; 18(8):3009-3019. PubMed ID: 31250652
    [TBL] [Abstract][Full Text] [Related]  

  • 23. An isochore map of human chromosomes.
    Costantini M; Clay O; Auletta F; Bernardi G
    Genome Res; 2006 Apr; 16(4):536-41. PubMed ID: 16597586
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Identification of missing proteins in the neXtProt database and unregistered phosphopeptides in the PhosphoSitePlus database as part of the Chromosome-centric Human Proteome Project.
    Shiromizu T; Adachi J; Watanabe S; Murakami T; Kuga T; Muraoka S; Tomonaga T
    J Proteome Res; 2013 Jun; 12(6):2414-21. PubMed ID: 23312004
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Systematic Proteogenomic Approach To Exploring a Novel Function for NHERF1 in Human Reproductive Disorder: Lessons for Exploring Missing Proteins.
    Na K; Shin H; Cho JY; Jung SH; Lim J; Lim JS; Kim EA; Kim HS; Kang AR; Kim JH; Shin JM; Jeong SK; Kim CY; Park JY; Chung HM; Omenn GS; Hancock WS; Paik YK
    J Proteome Res; 2017 Dec; 16(12):4455-4467. PubMed ID: 28960081
    [TBL] [Abstract][Full Text] [Related]  

  • 26. ASV-ID, a Proteogenomic Workflow To Predict Candidate Protein Isoforms on the Basis of Transcript Evidence.
    Jeong SK; Kim CY; Paik YK
    J Proteome Res; 2018 Dec; 17(12):4235-4242. PubMed ID: 30289715
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Identification and characterization of proteins encoded by chromosome 12 as part of chromosome-centric human proteome project.
    Manda SS; Nirujogi RS; Pinto SM; Kim MS; Datta KK; Sirdeshmukh R; Prasad TS; Thongboonkerd V; Pandey A; Gowda H
    J Proteome Res; 2014 Jul; 13(7):3166-77. PubMed ID: 24960282
    [TBL] [Abstract][Full Text] [Related]  

  • 28. A global map of human gene expression.
    Lukk M; Kapushesky M; Nikkilä J; Parkinson H; Goncalves A; Huber W; Ukkonen E; Brazma A
    Nat Biotechnol; 2010 Apr; 28(4):322-4. PubMed ID: 20379172
    [No Abstract]   [Full Text] [Related]  

  • 29. Mapping human chromosomes.
    Bently DR; Dunham I
    Curr Opin Genet Dev; 1995 Jun; 5(3):328-34. PubMed ID: 7549427
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Proteogenomics of Malignant Melanoma Cell Lines: The Effect of Stringency of Exome Data Filtering on Variant Peptide Identification in Shotgun Proteomics.
    Lobas AA; Pyatnitskiy MA; Chernobrovkin AL; Ilina IY; Karpov DS; Solovyeva EM; Kuznetsova KG; Ivanov MV; Lyssuk EY; Kliuchnikova AA; Voronko OE; Larin SS; Zubarev RA; Gorshkov MV; Moshkovskii SA
    J Proteome Res; 2018 May; 17(5):1801-1811. PubMed ID: 29619825
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Flexible Data Analysis Pipeline for High-Confidence Proteogenomics.
    Weisser H; Wright JC; Mudge JM; Gutenbrunner P; Choudhary JS
    J Proteome Res; 2016 Dec; 15(12):4686-4695. PubMed ID: 27786492
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Integrated Proteomic Pipeline Using Multiple Search Engines for a Proteogenomic Study with a Controlled Protein False Discovery Rate.
    Park GW; Hwang H; Kim KH; Lee JY; Lee HK; Park JY; Ji ES; Park SR; Yates JR; Kwon KH; Park YM; Lee HJ; Paik YK; Kim JY; Yoo JS
    J Proteome Res; 2016 Nov; 15(11):4082-4090. PubMed ID: 27537616
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A comprehensive human chromosome 21 database.
    Nguyen C; Thaicharoen S; Lacroix T; Gardiner K; Cios KJ
    IEEE Eng Med Biol Mag; 2007; 26(2):86-93. PubMed ID: 17441613
    [No Abstract]   [Full Text] [Related]  

  • 34. Methods for Optimization of Protein Extraction and Proteogenomic Mapping in Sweet Potato.
    Al-Mohanna T; Bokros NT; Ahsan N; Popescu GV; Popescu SC
    Methods Mol Biol; 2020; 2139():309-324. PubMed ID: 32462596
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Quantitative proteogenomics of human pathogens using DIA-MS.
    Malmström L; Bakochi A; Svensson G; Kilsgård O; Lantz H; Petersson AC; Hauri S; Karlsson C; Malmström J
    J Proteomics; 2015 Nov; 129():98-107. PubMed ID: 26381203
    [TBL] [Abstract][Full Text] [Related]  

  • 36. False discovery rate: the Achilles' heel of proteogenomics.
    Aggarwal S; Raj A; Kumar D; Dash D; Yadav AK
    Brief Bioinform; 2022 Sep; 23(5):. PubMed ID: 35534181
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A tool for integrating genetic and mass spectrometry-based peptide data: Proteogenomics Viewer: PV: A genome browser-like tool, which includes MS data visualization and peptide identification parameters.
    Kroll JE; da Silva VL; de Souza SJ; de Souza GA
    Bioessays; 2017 Jul; 39(7):. PubMed ID: 28582591
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Next Generation Proteomic Pipeline for Chromosome-Based Proteomic Research Using NeXtProt and GENCODE Databases.
    Hwang H; Park GW; Park JY; Lee HK; Lee JY; Jeong JE; Park SR; Yates JR; Kwon KH; Park YM; Lee HJ; Paik YK; Kim JY; Yoo JS
    J Proteome Res; 2017 Dec; 16(12):4425-4434. PubMed ID: 28965411
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Linkage disequilibrium maps and location databases.
    Tapper W
    Methods Mol Biol; 2007; 376():23-45. PubMed ID: 17984536
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Of mice and men: navigating public physical mapping databases.
    Stein LD
    Methods Biochem Anal; 1998; 39():268-98. PubMed ID: 9707935
    [No Abstract]   [Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.