These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

146 related articles for article (PubMed ID: 28132153)

  • 21. A Comprehensive Guide to Potato Transcriptome Assembly.
    Zagorščak M; Petek M
    Methods Mol Biol; 2021; 2354():155-192. PubMed ID: 34448160
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Identification of interleukin genes in Pogona vitticeps using a de novo transcriptome assembly from RNA-seq data.
    Livernois A; Hardy K; Domaschenz R; Papanicolaou A; Georges A; Sarre SD; Rao S; Ezaz T; Deakin JE
    Immunogenetics; 2016 Oct; 68(9):719-31. PubMed ID: 27255409
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Optimal assembly strategies of transcriptome related to ploidies of eukaryotic organisms.
    He B; Zhao S; Chen Y; Cao Q; Wei C; Cheng X; Zhang Y
    BMC Genomics; 2015 Feb; 16(1):65. PubMed ID: 25759274
    [TBL] [Abstract][Full Text] [Related]  

  • 24. TransRate: reference-free quality assessment of de novo transcriptome assemblies.
    Smith-Unna R; Boursnell C; Patro R; Hibberd JM; Kelly S
    Genome Res; 2016 Aug; 26(8):1134-44. PubMed ID: 27252236
    [TBL] [Abstract][Full Text] [Related]  

  • 25. A Robust Methodology for Assessing Differential Homeolog Contributions to the Transcriptomes of Allopolyploids.
    Boatwright JL; McIntyre LM; Morse AM; Chen S; Yoo MJ; Koh J; Soltis PS; Soltis DE; Barbazuk WB
    Genetics; 2018 Nov; 210(3):883-894. PubMed ID: 30213855
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Semantic Assembly and Annotation of Draft RNAseq Transcripts without a Reference Genome.
    Ptitsyn A; Temanni R; Bouchard C; Anderson PA
    PLoS One; 2015; 10(9):e0138006. PubMed ID: 26393794
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Comparing de novo and reference-based transcriptome assembly strategies by applying them to the blood-sucking bug Rhodnius prolixus.
    Marchant A; Mougel F; Mendonça V; Quartier M; Jacquin-Joly E; da Rosa JA; Petit E; Harry M
    Insect Biochem Mol Biol; 2016 Feb; 69():25-33. PubMed ID: 26005117
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Construction of a public CHO cell line transcript database using versatile bioinformatics analysis pipelines.
    Rupp O; Becker J; Brinkrolf K; Timmermann C; Borth N; Pühler A; Noll T; Goesmann A
    PLoS One; 2014; 9(1):e85568. PubMed ID: 24427317
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Bioinformatics Pipeline for Transcriptome Sequencing Analysis.
    Djebali S; Wucher V; Foissac S; Hitte C; Corre E; Derrien T
    Methods Mol Biol; 2017; 1468():201-19. PubMed ID: 27662878
    [TBL] [Abstract][Full Text] [Related]  

  • 30. High Throughput Sequencing-Based Approaches for Gene Expression Analysis.
    Reddy RRS; Ramanujam MV
    Methods Mol Biol; 2018; 1783():299-323. PubMed ID: 29767369
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Combined de novo and genome guided assembly and annotation of the Pinus patula juvenile shoot transcriptome.
    Visser EA; Wegrzyn JL; Steenkmap ET; Myburg AA; Naidoo S
    BMC Genomics; 2015 Dec; 16():1057. PubMed ID: 26652261
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Comprehensive evaluation of RNA-seq analysis pipelines in diploid and polyploid species.
    Payá-Milans M; Olmstead JW; Nunez G; Rinehart TA; Staton M
    Gigascience; 2018 Dec; 7(12):. PubMed ID: 30418578
    [TBL] [Abstract][Full Text] [Related]  

  • 33. TRAPID: an efficient online tool for the functional and comparative analysis of de novo RNA-Seq transcriptomes.
    Van Bel M; Proost S; Van Neste C; Deforce D; Van de Peer Y; Vandepoele K
    Genome Biol; 2013 Dec; 14(12):R134. PubMed ID: 24330842
    [TBL] [Abstract][Full Text] [Related]  

  • 34. A high-quality annotated transcriptome of swine peripheral blood.
    Liu H; Smith TPL; Nonneman DJ; Dekkers JCM; Tuggle CK
    BMC Genomics; 2017 Jun; 18(1):479. PubMed ID: 28646867
    [TBL] [Abstract][Full Text] [Related]  

  • 35. The origin of the C-genome and cytoplasm of Avena polyploids.
    Nikoloudakis N; Katsiotis A
    Theor Appl Genet; 2008 Jul; 117(2):273-81. PubMed ID: 18463841
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Optimizing and benchmarking de novo transcriptome sequencing: from library preparation to assembly evaluation.
    Hara Y; Tatsumi K; Yoshida M; Kajikawa E; Kiyonari H; Kuraku S
    BMC Genomics; 2015 Nov; 16():977. PubMed ID: 26581708
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A transcriptome atlas of rabbit revealed by PacBio single-molecule long-read sequencing.
    Chen SY; Deng F; Jia X; Li C; Lai SJ
    Sci Rep; 2017 Aug; 7(1):7648. PubMed ID: 28794490
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Subgenome-specific assembly of vitamin E biosynthesis genes and expression patterns during seed development provide insight into the evolution of oat genome.
    Gutierrez-Gonzalez JJ; Garvin DF
    Plant Biotechnol J; 2016 Nov; 14(11):2147-2157. PubMed ID: 27135276
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Rnnotator: an automated de novo transcriptome assembly pipeline from stranded RNA-Seq reads.
    Martin J; Bruno VM; Fang Z; Meng X; Blow M; Zhang T; Sherlock G; Snyder M; Wang Z
    BMC Genomics; 2010 Nov; 11():663. PubMed ID: 21106091
    [TBL] [Abstract][Full Text] [Related]  

  • 40. De Novo Transcriptomic Approach to Study Thyroid Hormone Receptor Action in Non-mammalian Models.
    Buisine N; Kerdivel G; Sachs LM
    Methods Mol Biol; 2018; 1801():265-285. PubMed ID: 29892831
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.