436 related articles for article (PubMed ID: 28153045)
1. Visualizing phylogenetic tree landscapes.
Wilgenbusch JC; Huang W; Gallivan KA
BMC Bioinformatics; 2017 Feb; 18(1):85. PubMed ID: 28153045
[TBL] [Abstract][Full Text] [Related]
2. SATe-II: very fast and accurate simultaneous estimation of multiple sequence alignments and phylogenetic trees.
Liu K; Warnow TJ; Holder MT; Nelesen SM; Yu J; Stamatakis AP; Linder CR
Syst Biol; 2012 Jan; 61(1):90-106. PubMed ID: 22139466
[TBL] [Abstract][Full Text] [Related]
3. The influence of molecular markers and methods on inferring the phylogenetic relationships between the representatives of the Arini (parrots, Psittaciformes), determined on the basis of their complete mitochondrial genomes.
Urantowka AD; Kroczak A; Mackiewicz P
BMC Evol Biol; 2017 Jul; 17(1):166. PubMed ID: 28705202
[TBL] [Abstract][Full Text] [Related]
4. Trees of trees: an approach to comparing multiple alternative phylogenies.
Nye TM
Syst Biol; 2008 Oct; 57(5):785-94. PubMed ID: 18853364
[TBL] [Abstract][Full Text] [Related]
5. Exploring the relationship between sequence similarity and accurate phylogenetic trees.
Cantarel BL; Morrison HG; Pearson W
Mol Biol Evol; 2006 Nov; 23(11):2090-100. PubMed ID: 16891377
[TBL] [Abstract][Full Text] [Related]
6. On the quality of tree-based protein classification.
Lazareva-Ulitsky B; Diemer K; Thomas PD
Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
[TBL] [Abstract][Full Text] [Related]
7. Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences.
Auch AF; Henz SR; Holland BR; Göker M
BMC Bioinformatics; 2006 Jul; 7():350. PubMed ID: 16854218
[TBL] [Abstract][Full Text] [Related]
8. treespace: Statistical exploration of landscapes of phylogenetic trees.
Jombart T; Kendall M; Almagro-Garcia J; Colijn C
Mol Ecol Resour; 2017 Nov; 17(6):1385-1392. PubMed ID: 28374552
[TBL] [Abstract][Full Text] [Related]
9. MitoPhAST, a new automated mitogenomic phylogeny tool in the post-genomic era with a case study of 89 decapod mitogenomes including eight new freshwater crayfish mitogenomes.
Tan MH; Gan HM; Schultz MB; Austin CM
Mol Phylogenet Evol; 2015 Apr; 85():180-8. PubMed ID: 25721538
[TBL] [Abstract][Full Text] [Related]
10. Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.
Fouquier J; Rideout JR; Bolyen E; Chase J; Shiffer A; McDonald D; Knight R; Caporaso JG; Kelley ST
Microbiome; 2016 Feb; 4():11. PubMed ID: 26905735
[TBL] [Abstract][Full Text] [Related]
11. A new fast method for inferring multiple consensus trees using k-medoids.
Tahiri N; Willems M; Makarenkov V
BMC Evol Biol; 2018 Apr; 18(1):48. PubMed ID: 29621975
[TBL] [Abstract][Full Text] [Related]
12. GATC: a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss model of evolution.
Noutahi E; El-Mabrouk N
BMC Genomics; 2018 May; 19(Suppl 2):102. PubMed ID: 29764363
[TBL] [Abstract][Full Text] [Related]
13. Is homoplasy or lineage sorting the source of incongruent mtdna and nuclear gene trees in the stiff-tailed ducks (Nomonyx-Oxyura)?
McCracken K; Sorenson M
Syst Biol; 2005 Feb; 54(1):35-55. PubMed ID: 15805009
[TBL] [Abstract][Full Text] [Related]
14. Testing mitochondrial sequences and anonymous nuclear markers for phylogeny reconstruction in a rapidly radiating group: molecular systematics of the Delphininae (Cetacea: Odontoceti: Delphinidae).
Kingston SE; Adams LD; Rosel PE
BMC Evol Biol; 2009 Oct; 9():245. PubMed ID: 19811651
[TBL] [Abstract][Full Text] [Related]
15. Nematode small subunit phylogeny correlates with alignment parameters.
Smythe AB; Sanderson MJ; Nadler SA
Syst Biol; 2006 Dec; 55(6):972-92. PubMed ID: 17345678
[TBL] [Abstract][Full Text] [Related]
16. The effect of the guide tree on multiple sequence alignments and subsequent phylogenetic analyses.
Nelesen S; Liu K; Zhao D; Linder CR; Warnow T
Pac Symp Biocomput; 2008; ():25-36. PubMed ID: 18229674
[TBL] [Abstract][Full Text] [Related]
17. Analyzing and synthesizing phylogenies using tree alignment graphs.
Smith SA; Brown JW; Hinchliff CE
PLoS Comput Biol; 2013; 9(9):e1003223. PubMed ID: 24086118
[TBL] [Abstract][Full Text] [Related]
18. Congruence between nuclear and mitochondrial DNA: combination of multiple nuclear introns resolves a well-supported phylogeny of New World orioles (Icterus).
Jacobsen F; Friedman NR; Omland KE
Mol Phylogenet Evol; 2010 Jul; 56(1):419-27. PubMed ID: 20363347
[TBL] [Abstract][Full Text] [Related]
19. Evaluating the relationship between evolutionary divergence and phylogenetic accuracy in AFLP data sets.
García-Pereira MJ; Caballero A; Quesada H
Mol Biol Evol; 2010 May; 27(5):988-1000. PubMed ID: 20026482
[TBL] [Abstract][Full Text] [Related]
20. Genome-Wide Comparative Analysis of Phylogenetic Trees: The Prokaryotic Forest of Life.
Puigbò P; Wolf YI; Koonin EV
Methods Mol Biol; 2019; 1910():241-269. PubMed ID: 31278667
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
