These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
43. A network inference workflow applied to virulence-related processes in Salmonella typhimurium. Taylor RC; Singhal M; Weller J; Khoshnevis S; Shi L; McDermott J Ann N Y Acad Sci; 2009 Mar; 1158():143-58. PubMed ID: 19348639 [TBL] [Abstract][Full Text] [Related]
44. Inference of Large-scale Time-delayed Gene Regulatory Network with Parallel MapReduce Cloud Platform. Yang B; Bao W; Huang DS; Chen Y Sci Rep; 2018 Dec; 8(1):17787. PubMed ID: 30542062 [TBL] [Abstract][Full Text] [Related]
45. Path2enet: generation of human pathway-derived networks in an expression specific context. Droste C; De Las Rivas J BMC Genomics; 2016 Oct; 17(Suppl 8):731. PubMed ID: 27801297 [TBL] [Abstract][Full Text] [Related]
46. Biological Network Inference from Microarray Data, Current Solutions, and Assessments. Roy S; Guzzi PH Methods Mol Biol; 2016; 1375():155-67. PubMed ID: 26507508 [TBL] [Abstract][Full Text] [Related]
47. Inference of gene networks--application to Bifidobacterium. Lai D; Yang X; Wu G; Liu Y; Nardini C Bioinformatics; 2011 Jan; 27(2):232-7. PubMed ID: 21075742 [TBL] [Abstract][Full Text] [Related]
48. BGRMI: A method for inferring gene regulatory networks from time-course gene expression data and its application in breast cancer research. Iglesias-Martinez LF; Kolch W; Santra T Sci Rep; 2016 Nov; 6():37140. PubMed ID: 27876826 [TBL] [Abstract][Full Text] [Related]
49. Inferring Large-Scale Gene Regulatory Networks Using a Randomized Algorithm Based on Singular Value Decomposition. Fan A; Wang H; Xiang H; Zou X IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(6):1997-2008. PubMed ID: 29993839 [TBL] [Abstract][Full Text] [Related]
50. The Reconstruction and Analysis of Gene Regulatory Networks. Zheng G; Huang T Methods Mol Biol; 2018; 1754():137-154. PubMed ID: 29536441 [TBL] [Abstract][Full Text] [Related]
51. Designing a parallel evolutionary algorithm for inferring gene networks on the cloud computing environment. Lee WP; Hsiao YT; Hwang WC BMC Syst Biol; 2014 Jan; 8():5. PubMed ID: 24428926 [TBL] [Abstract][Full Text] [Related]
52. Gene Regulatory Network Inference from Single-Cell Data Using Multivariate Information Measures. Chan TE; Stumpf MPH; Babtie AC Cell Syst; 2017 Sep; 5(3):251-267.e3. PubMed ID: 28957658 [TBL] [Abstract][Full Text] [Related]
53. Ensemble-based network aggregation improves the accuracy of gene network reconstruction. Zhong R; Allen JD; Xiao G; Xie Y PLoS One; 2014; 9(11):e106319. PubMed ID: 25390635 [TBL] [Abstract][Full Text] [Related]
54. Accelerated parallel algorithm for gene network reverse engineering. He J; Zhou Z; Reed M; Califano A BMC Syst Biol; 2017 Sep; 11(Suppl 4):83. PubMed ID: 28950860 [TBL] [Abstract][Full Text] [Related]
56. Development and use of a Cytoscape app for GRNCOP2. Díaz-Montaña JJ; Díaz-Díaz N; Barranco CD; Ponzoni I Comput Methods Programs Biomed; 2019 Aug; 177():211-218. PubMed ID: 31319950 [TBL] [Abstract][Full Text] [Related]
57. A Sparse Reconstruction Approach for Identifying Gene Regulatory Networks Using Steady-State Experiment Data. Zhang W; Zhou T PLoS One; 2015; 10(7):e0130979. PubMed ID: 26207991 [TBL] [Abstract][Full Text] [Related]
58. Multi-objective context-guided consensus of a massive array of techniques for the inference of Gene Regulatory Networks. Segura-Ortiz A; García-Nieto J; Aldana-Montes JF; Navas-Delgado I Comput Biol Med; 2024 Sep; 179():108850. PubMed ID: 39013340 [TBL] [Abstract][Full Text] [Related]
59. SIGNET: transcriptome-wide causal inference for gene regulatory networks. Jiang Z; Chen C; Xu Z; Wang X; Zhang M; Zhang D Sci Rep; 2023 Nov; 13(1):19371. PubMed ID: 37938594 [TBL] [Abstract][Full Text] [Related]