These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

202 related articles for article (PubMed ID: 28186907)

  • 1. Identifying Sigma70 Promoters with Novel Pseudo Nucleotide Composition.
    Lin H; Liang ZY; Tang H; Chen W
    IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1316-1321. PubMed ID: 28186907
    [TBL] [Abstract][Full Text] [Related]  

  • 2. iPro70-FMWin: identifying Sigma70 promoters using multiple windowing and minimal features.
    Rahman MS; Aktar U; Jani MR; Shatabda S
    Mol Genet Genomics; 2019 Feb; 294(1):69-84. PubMed ID: 30187132
    [TBL] [Abstract][Full Text] [Related]  

  • 3. iPromoter-2L: a two-layer predictor for identifying promoters and their types by multi-window-based PseKNC.
    Liu B; Yang F; Huang DS; Chou KC
    Bioinformatics; 2018 Jan; 34(1):33-40. PubMed ID: 28968797
    [TBL] [Abstract][Full Text] [Related]  

  • 4. iPro54-PseKNC: a sequence-based predictor for identifying sigma-54 promoters in prokaryote with pseudo k-tuple nucleotide composition.
    Lin H; Deng EZ; Ding H; Chen W; Chou KC
    Nucleic Acids Res; 2014 Dec; 42(21):12961-72. PubMed ID: 25361964
    [TBL] [Abstract][Full Text] [Related]  

  • 5. 70ProPred: a predictor for discovering sigma70 promoters based on combining multiple features.
    He W; Jia C; Duan Y; Zou Q
    BMC Syst Biol; 2018 Apr; 12(Suppl 4):44. PubMed ID: 29745856
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Assessing the effects of data selection and representation on the development of reliable E. coli sigma 70 promoter region predictors.
    Abbas MM; Mohie-Eldin MM; El-Manzalawy Y
    PLoS One; 2015; 10(3):e0119721. PubMed ID: 25803493
    [TBL] [Abstract][Full Text] [Related]  

  • 7. iTIS-PseTNC: a sequence-based predictor for identifying translation initiation site in human genes using pseudo trinucleotide composition.
    Chen W; Feng PM; Deng EZ; Lin H; Chou KC
    Anal Biochem; 2014 Oct; 462():76-83. PubMed ID: 25016190
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Region 2.5 of the Escherichia coli RNA polymerase sigma70 subunit is responsible for the recognition of the 'extended-10' motif at promoters.
    Barne KA; Bown JA; Busby SJ; Minchin SD
    EMBO J; 1997 Jul; 16(13):4034-40. PubMed ID: 9233812
    [TBL] [Abstract][Full Text] [Related]  

  • 9. iNuc-PseKNC: a sequence-based predictor for predicting nucleosome positioning in genomes with pseudo k-tuple nucleotide composition.
    Guo SH; Deng EZ; Xu LQ; Ding H; Lin H; Chen W; Chou KC
    Bioinformatics; 2014 Jun; 30(11):1522-9. PubMed ID: 24504871
    [TBL] [Abstract][Full Text] [Related]  

  • 10. iRSpot-PseDNC: identify recombination spots with pseudo dinucleotide composition.
    Chen W; Feng PM; Lin H; Chou KC
    Nucleic Acids Res; 2013 Apr; 41(6):e68. PubMed ID: 23303794
    [TBL] [Abstract][Full Text] [Related]  

  • 11. iPSW(2L)-PseKNC: A two-layer predictor for identifying promoters and their strength by hybrid features via pseudo K-tuple nucleotide composition.
    Xiao X; Xu ZC; Qiu WR; Wang P; Ge HT; Chou KC
    Genomics; 2019 Dec; 111(6):1785-1793. PubMed ID: 30529532
    [TBL] [Abstract][Full Text] [Related]  

  • 12. iDNA-Methyl: identifying DNA methylation sites via pseudo trinucleotide composition.
    Liu Z; Xiao X; Qiu WR; Chou KC
    Anal Biochem; 2015 Apr; 474():69-77. PubMed ID: 25596338
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Sigma70 promoters in Escherichia coli: specific transcription in dense regions of overlapping promoter-like signals.
    Huerta AM; Collado-Vides J
    J Mol Biol; 2003 Oct; 333(2):261-78. PubMed ID: 14529615
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Combining pseudo dinucleotide composition with the Z curve method to improve the accuracy of predicting DNA elements: a case study in recombination spots.
    Dong C; Yuan YZ; Zhang FZ; Hua HL; Ye YN; Labena AA; Lin H; Chen W; Guo FB
    Mol Biosyst; 2016 Aug; 12(9):2893-900. PubMed ID: 27410247
    [TBL] [Abstract][Full Text] [Related]  

  • 15. GPMiner: an integrated system for mining combinatorial cis-regulatory elements in mammalian gene group.
    Lee TY; Chang WC; Hsu JB; Chang TH; Shien DM
    BMC Genomics; 2012; 13 Suppl 1(Suppl 1):S3. PubMed ID: 22369687
    [TBL] [Abstract][Full Text] [Related]  

  • 16. iRNA-AI: identifying the adenosine to inosine editing sites in RNA sequences.
    Chen W; Feng P; Yang H; Ding H; Lin H; Chou KC
    Oncotarget; 2017 Jan; 8(3):4208-4217. PubMed ID: 27926534
    [TBL] [Abstract][Full Text] [Related]  

  • 17. iPromoter-BnCNN: a novel branched CNN-based predictor for identifying and classifying sigma promoters.
    Amin R; Rahman CR; Ahmed S; Sifat MHR; Liton MNK; Rahman MM; Khan MZH; Shatabda S
    Bioinformatics; 2020 Dec; 36(19):4869-4875. PubMed ID: 32614400
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Substitutions in the Escherichia coli RNA polymerase sigma70 factor that affect recognition of extended -10 elements at promoters.
    Sanderson A; Mitchell JE; Minchin SD; Busby SJ
    FEBS Lett; 2003 Jun; 544(1-3):199-205. PubMed ID: 12782316
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Computational Prediction of Sigma-54 Promoters in Bacterial Genomes by Integrating Motif Finding and Machine Learning Strategies.
    Liu B; Han L; Liu X; Wu J; Ma Q
    IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1211-1218. PubMed ID: 29993815
    [TBL] [Abstract][Full Text] [Related]  

  • 20. iPro2L-PSTKNC: A Two-Layer Predictor for Discovering Various Types of Promoters by Position Specific of Nucleotide Composition.
    Lyu Y; He W; Li S; Zou Q; Guo F
    IEEE J Biomed Health Inform; 2021 Jun; 25(6):2329-2337. PubMed ID: 32976109
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.