BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

200 related articles for article (PubMed ID: 28187155)

  • 1. In Silico identification and annotation of non-coding RNAs by RNA-seq and De Novo assembly of the transcriptome of Tomato Fruits.
    Scarano D; Rao R; Corrado G
    PLoS One; 2017; 12(2):e0171504. PubMed ID: 28187155
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identification of alternative splicing events by RNA sequencing in early growth tomato fruits.
    Sun Y; Xiao H
    BMC Genomics; 2015 Nov; 16():948. PubMed ID: 26573826
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The first de novo transcriptome of pepino (Solanum muricatum): assembly, comprehensive analysis and comparison with the closely related species S. caripense, potato and tomato.
    Herraiz FJ; Blanca J; Ziarsolo P; Gramazio P; Plazas M; Anderson GJ; Prohens J; Vilanova S
    BMC Genomics; 2016 May; 17():321. PubMed ID: 27142449
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Whole transcriptome sequencing reveals genes involved in plastid/chloroplast division and development are regulated by the HP1/DDB1 at an early stage of tomato fruit development.
    Tang X; Tang Z; Huang S; Liu J; Liu J; Shi W; Tian X; Li Y; Zhang D; Yang J; Gao Y; Zeng D; Hou P; Niu X; Cao Y; Li G; Li X; Xiao F; Liu Y
    Planta; 2013 Nov; 238(5):923-36. PubMed ID: 23948801
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Deep RNA-Seq uncovers the peach transcriptome landscape.
    Wang L; Zhao S; Gu C; Zhou Y; Zhou H; Ma J; Cheng J; Han Y
    Plant Mol Biol; 2013 Nov; 83(4-5):365-77. PubMed ID: 23783411
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Identification and genetic analysis of alternative splicing of long non-coding RNAs in tomato initial flowering stage.
    Yang Z; Yang Z; Yang C; Wang Z; Chen D; Xie Y; Wu Y
    Genomics; 2020 Jan; 112(1):897-907. PubMed ID: 31175976
    [TBL] [Abstract][Full Text] [Related]  

  • 7. De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and SolanumĀ  lycopersicum var. cerasiforme, by long-read sequencing.
    Takei H; Shirasawa K; Kuwabara K; Toyoda A; Matsuzawa Y; Iioka S; Ariizumi T
    DNA Res; 2021 Jan; 28(1):. PubMed ID: 33475141
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-wide identification of circRNAs involved in tomato fruit coloration.
    Zhou R; Xu L; Zhao L; Wang Y; Zhao T
    Biochem Biophys Res Commun; 2018 May; 499(3):466-469. PubMed ID: 29580993
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comparative transcriptome analysis of tomato (Solanum lycopersicum) in response to exogenous abscisic acid.
    Wang Y; Tao X; Tang XM; Xiao L; Sun JL; Yan XF; Li D; Deng HY; Ma XR
    BMC Genomics; 2013 Dec; 14(1):841. PubMed ID: 24289302
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Re-analysis of long non-coding RNAs and prediction of circRNAs reveal their novel roles in susceptible tomato following TYLCV infection.
    Wang J; Yang Y; Jin L; Ling X; Liu T; Chen T; Ji Y; Yu W; Zhang B
    BMC Plant Biol; 2018 Jun; 18(1):104. PubMed ID: 29866032
    [TBL] [Abstract][Full Text] [Related]  

  • 11. RNA sequencing and functional analysis implicate the regulatory role of long non-coding RNAs in tomato fruit ripening.
    Zhu B; Yang Y; Li R; Fu D; Wen L; Luo Y; Zhu H
    J Exp Bot; 2015 Aug; 66(15):4483-95. PubMed ID: 25948705
    [TBL] [Abstract][Full Text] [Related]  

  • 12. De novo reconstruction of the Toxoplasma gondii transcriptome improves on the current genome annotation and reveals alternatively spliced transcripts and putative long non-coding RNAs.
    Hassan MA; Melo MB; Haas B; Jensen KD; Saeij JP
    BMC Genomics; 2012 Dec; 13():696. PubMed ID: 23231500
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
    Hoang NV; Furtado A; Mason PJ; Marquardt A; Kasirajan L; Thirugnanasambandam PP; Botha FC; Henry RJ
    BMC Genomics; 2017 May; 18(1):395. PubMed ID: 28532419
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genomic profiling of exogenous abscisic acid-responsive microRNAs in tomato (Solanum lycopersicum).
    Cheng HY; Wang Y; Tao X; Fan YF; Dai Y; Yang H; Ma XR
    BMC Genomics; 2016 Jun; 17():423. PubMed ID: 27260799
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PacBio full-length cDNA sequencing integrated with RNA-seq reads drastically improves the discovery of splicing transcripts in rice.
    Zhang G; Sun M; Wang J; Lei M; Li C; Zhao D; Huang J; Li W; Li S; Li J; Yang J; Luo Y; Hu S; Zhang B
    Plant J; 2019 Jan; 97(2):296-305. PubMed ID: 30288819
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genome-wide identification of pistil-specific genes expressed during fruit set initiation in tomato (Solanum lycopersicum).
    Ezura K; Ji-Seong K; Mori K; Suzuki Y; Kuhara S; Ariizumi T; Ezura H
    PLoS One; 2017; 12(7):e0180003. PubMed ID: 28683065
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Characterization of the tomato ARF gene family uncovers a multi-levels post-transcriptional regulation including alternative splicing.
    Zouine M; Fu Y; Chateigner-Boutin AL; Mila I; Frasse P; Wang H; Audran C; Roustan JP; Bouzayen M
    PLoS One; 2014; 9(1):e84203. PubMed ID: 24427281
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variations.
    Ercolano MR; Sacco A; Ferriello F; D'Alessandro R; Tononi P; Traini A; Barone A; Zago E; Chiusano ML; Buson G; Delledonne M; Frusciante L
    BMC Genomics; 2014 Feb; 15():138. PubMed ID: 24548308
    [TBL] [Abstract][Full Text] [Related]  

  • 19. RNA-seq analysis of Quercus pubescens Leaves: de novo transcriptome assembly, annotation and functional markers development.
    Torre S; Tattini M; Brunetti C; Fineschi S; Fini A; Ferrini F; Sebastiani F
    PLoS One; 2014; 9(11):e112487. PubMed ID: 25393112
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Genome-wide profiling of long non-coding RNAs from tomato and a comparison with mRNAs associated with the regulation of fruit ripening.
    Wang M; Zhao W; Gao L; Zhao L
    BMC Plant Biol; 2018 May; 18(1):75. PubMed ID: 29728060
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.