195 related articles for article (PubMed ID: 28187155)
21. Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote.
Liu S; Zhang Y; Zhou Z; Waldbieser G; Sun F; Lu J; Zhang J; Jiang Y; Zhang H; Wang X; Rajendran KV; Khoo L; Kucuktas H; Peatman E; Liu Z
BMC Genomics; 2012 Nov; 13():595. PubMed ID: 23127152
[TBL] [Abstract][Full Text] [Related]
22. Transcriptome assembly, gene annotation and tissue gene expression atlas of the rainbow trout.
Salem M; Paneru B; Al-Tobasei R; Abdouni F; Thorgaard GH; Rexroad CE; Yao J
PLoS One; 2015; 10(3):e0121778. PubMed ID: 25793877
[TBL] [Abstract][Full Text] [Related]
23. Comparative RNA-Seq Analysis Reveals Potentially Resistance-Related Genes in Response to Bacterial Canker of Tomato.
Pereyra-Bistraín LI; Ovando-Vázquez C; Rougon-Cardoso A; Alpuche-Solís ÁG
Genes (Basel); 2021 Oct; 12(11):. PubMed ID: 34828351
[TBL] [Abstract][Full Text] [Related]
24. De Novo Plant Transcriptome Assembly and Annotation Using Illumina RNA-Seq Reads.
Kerr SC; Gaiti F; Tanurdzic M
Methods Mol Biol; 2019; 1933():265-275. PubMed ID: 30945191
[TBL] [Abstract][Full Text] [Related]
25. RNA-seq analysis of Rubus idaeus cv. Nova: transcriptome sequencing and de novo assembly for subsequent functional genomics approaches.
Hyun TK; Lee S; Kumar D; Rim Y; Kumar R; Lee SY; Lee CH; Kim JY
Plant Cell Rep; 2014 Oct; 33(10):1617-28. PubMed ID: 25023872
[TBL] [Abstract][Full Text] [Related]
26. SRNAome parsing yields insights into tomato fruit ripening control.
Zuo J; Fu D; Zhu Y; Qu G; Tian H; Zhai B; Ju Z; Gao C; Wang Y; Luo Y; Zhu B
Physiol Plant; 2013 Dec; 149(4):540-53. PubMed ID: 23550530
[TBL] [Abstract][Full Text] [Related]
27. Polymorphism identification and improved genome annotation of Brassica rapa through Deep RNA sequencing.
Devisetty UK; Covington MF; Tat AV; Lekkala S; Maloof JN
G3 (Bethesda); 2014 Aug; 4(11):2065-78. PubMed ID: 25122667
[TBL] [Abstract][Full Text] [Related]
28. Transcriptome profiling of sorted endoreduplicated nuclei from tomato fruits: how the global shift in expression ascribed to DNA ploidy influences RNA-Seq data normalization and interpretation.
Pirrello J; Deluche C; Frangne N; Gévaudant F; Maza E; Djari A; Bourge M; Renaudin JP; Brown S; Bowler C; Zouine M; Chevalier C; Gonzalez N
Plant J; 2018 Jan; 93(2):387-398. PubMed ID: 29172253
[TBL] [Abstract][Full Text] [Related]
29. The
Stam R; Nosenko T; Hörger AC; Stephan W; Seidel M; Kuhn JMM; Haberer G; Tellier A
G3 (Bethesda); 2019 Dec; 9(12):3933-3941. PubMed ID: 31604826
[TBL] [Abstract][Full Text] [Related]
30. RNA at 92 °C: the non-coding transcriptome of the hyperthermophilic archaeon Pyrococcus abyssi.
Toffano-Nioche C; Ott A; Crozat E; Nguyen AN; Zytnicki M; Leclerc F; Forterre P; Bouloc P; Gautheret D
RNA Biol; 2013 Jul; 10(7):1211-20. PubMed ID: 23884177
[TBL] [Abstract][Full Text] [Related]
31. Comparative transcriptome analysis provides insights into dwarfism in cherry tomato (Solanum lycopersicum var. cerasiforme).
Rahim MA; Jung HJ; Afrin KS; Lee JH; Nou IS
PLoS One; 2018; 13(12):e0208770. PubMed ID: 30532198
[TBL] [Abstract][Full Text] [Related]
32. Identification of alternatively spliced gene isoforms and novel noncoding RNAs by single-molecule long-read sequencing in
Hu Z; Lyu T; Yan C; Wang Y; Ye N; Fan Z; Li X; Li J; Yin H
RNA Biol; 2020 Jul; 17(7):966-976. PubMed ID: 32160106
[TBL] [Abstract][Full Text] [Related]
33. New insights in the control of antioxidants accumulation in tomato by transcriptomic analyses of genotypes exhibiting contrasting levels of fruit metabolites.
Sacco A; Raiola A; Calafiore R; Barone A; Rigano MM
BMC Genomics; 2019 Jan; 20(1):43. PubMed ID: 30646856
[TBL] [Abstract][Full Text] [Related]
34. Transcriptome-wide identification of host genes targeted by tomato spotted wilt virus-derived small interfering RNAs.
Ramesh SV; Williams S; Kappagantu M; Mitter N; Pappu HR
Virus Res; 2017 Jun; 238():13-23. PubMed ID: 28545854
[TBL] [Abstract][Full Text] [Related]
35. Transcriptome Profiling of Tomato Fruit Development Reveals Transcription Factors Associated with Ascorbic Acid, Carotenoid and Flavonoid Biosynthesis.
Ye J; Hu T; Yang C; Li H; Yang M; Ijaz R; Ye Z; Zhang Y
PLoS One; 2015; 10(7):e0130885. PubMed ID: 26133783
[TBL] [Abstract][Full Text] [Related]
36. Transcriptome analysis of cytokinin response in tomato leaves.
Shi X; Gupta S; Lindquist IE; Cameron CT; Mudge J; Rashotte AM
PLoS One; 2013; 8(1):e55090. PubMed ID: 23372818
[TBL] [Abstract][Full Text] [Related]
37. The arbuscular mycorrhizal status has an impact on the transcriptome profile and amino acid composition of tomato fruit.
Salvioli A; Zouari I; Chalot M; Bonfante P
BMC Plant Biol; 2012 Mar; 12():44. PubMed ID: 22452950
[TBL] [Abstract][Full Text] [Related]
38. Relationships between genome methylation, levels of non-coding RNAs, mRNAs and metabolites in ripening tomato fruit.
Zuo J; Grierson D; Courtney LT; Wang Y; Gao L; Zhao X; Zhu B; Luo Y; Wang Q; Giovannoni JJ
Plant J; 2020 Aug; 103(3):980-994. PubMed ID: 32314448
[TBL] [Abstract][Full Text] [Related]
39. De novo transcriptome assembly from inflorescence of Orchis italica: analysis of coding and non-coding transcripts.
De Paolo S; Salvemini M; Gaudio L; Aceto S
PLoS One; 2014; 9(7):e102155. PubMed ID: 25025767
[TBL] [Abstract][Full Text] [Related]
40. TomExpress, a unified tomato RNA-Seq platform for visualization of expression data, clustering and correlation networks.
Zouine M; Maza E; Djari A; Lauvernier M; Frasse P; Smouni A; Pirrello J; Bouzayen M
Plant J; 2017 Nov; 92(4):727-735. PubMed ID: 28873253
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]