These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

78 related articles for article (PubMed ID: 28189763)

  • 1. Analysis of steric effects in DamID profiling of transcription factor target genes.
    Ramialison M; Waardenberg AJ; Schonrock N; Doan T; de Jong D; Bouveret R; Harvey RP
    Genomics; 2017 Mar; 109(2):75-82. PubMed ID: 28189763
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identification of in vivo DNA targets of chromatin proteins using tethered dam methyltransferase.
    van Steensel B; Henikoff S
    Nat Biotechnol; 2000 Apr; 18(4):424-8. PubMed ID: 10748524
    [TBL] [Abstract][Full Text] [Related]  

  • 3. DamID: mapping of in vivo protein-genome interactions using tethered DNA adenine methyltransferase.
    Greil F; Moorman C; van Steensel B
    Methods Enzymol; 2006; 410():342-59. PubMed ID: 16938559
    [TBL] [Abstract][Full Text] [Related]  

  • 4. DamID-seq: A Genome-Wide DNA Methylation Method that Captures Both Transient and Stable TF-DNA Interactions in Plant Cells.
    Alvarez JM; Hinckley WE; Leonelli L; Brooks MD; Coruzzi GM
    Methods Mol Biol; 2023; 2698():87-107. PubMed ID: 37682471
    [TBL] [Abstract][Full Text] [Related]  

  • 5. DamID as a versatile tool for understanding gene regulation.
    Aughey GN; Cheetham SW; Southall TD
    Development; 2019 Mar; 146(6):. PubMed ID: 30877125
    [TBL] [Abstract][Full Text] [Related]  

  • 6. NKX2-5 mutations causative for congenital heart disease retain functionality and are directed to hundreds of targets.
    Bouveret R; Waardenberg AJ; Schonrock N; Ramialison M; Doan T; de Jong D; Bondue A; Kaur G; Mohamed S; Fonoudi H; Chen CM; Wouters MA; Bhattacharya S; Plachta N; Dunwoodie SL; Chapman G; Blanpain C; Harvey RP
    Elife; 2015 Jul; 4():. PubMed ID: 26146939
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DamID-seq: Genome-wide Mapping of Protein-DNA Interactions by High Throughput Sequencing of Adenine-methylated DNA Fragments.
    Wu F; Olson BG; Yao J
    J Vis Exp; 2016 Jan; (107):e53620. PubMed ID: 26862720
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Zac1 is an essential transcription factor for cardiac morphogenesis.
    Yuasa S; Onizuka T; Shimoji K; Ohno Y; Kageyama T; Yoon SH; Egashira T; Seki T; Hashimoto H; Nishiyama T; Kaneda R; Murata M; Hattori F; Makino S; Sano M; Ogawa S; Prall OW; Harvey RP; Fukuda K
    Circ Res; 2010 Apr; 106(6):1083-91. PubMed ID: 20167925
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Dam mutants provide improved sensitivity and spatial resolution for profiling transcription factor binding.
    Szczesnik T; Ho JWK; Sherwood R
    Epigenetics Chromatin; 2019 Jun; 12(1):36. PubMed ID: 31196130
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Cardiac transcription factor Nkx2.5 interacts with p53 and modulates its activity.
    Kojic S; Nestorovic A; Rakicevic L; Protic O; Jasnic-Savovic J; Faulkner G; Radojkovic D
    Arch Biochem Biophys; 2015 Mar; 569():45-53. PubMed ID: 25677450
    [TBL] [Abstract][Full Text] [Related]  

  • 11. DamID: a methylation-based chromatin profiling approach.
    Orian A; Abed M; Kenyagin-Karsenti D; Boico O
    Methods Mol Biol; 2009; 567():155-69. PubMed ID: 19588092
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Nuclear Receptor-Like Structure and Interaction of Congenital Heart Disease-Associated Factors GATA4 and NKX2-5.
    Kinnunen S; Välimäki M; Tölli M; Wohlfahrt G; Darwich R; Komati H; Nemer M; Ruskoaho H
    PLoS One; 2015; 10(12):e0144145. PubMed ID: 26642209
    [TBL] [Abstract][Full Text] [Related]  

  • 13. DamID, a new tool for studying plant chromatin profiling in vivo, and its use to identify putative LHP1 target loci.
    Germann S; Juul-Jensen T; Letarnec B; Gaudin V
    Plant J; 2006 Oct; 48(1):153-63. PubMed ID: 16972870
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Crystal structure of a ternary SAP-1/SRF/c-fos SRE DNA complex.
    Mo Y; Ho W; Johnston K; Marmorstein R
    J Mol Biol; 2001 Nov; 314(3):495-506. PubMed ID: 11846562
    [TBL] [Abstract][Full Text] [Related]  

  • 15. FLI1 and EWS-FLI1 function as ternary complex factors and ELK1 and SAP1a function as ternary and quaternary complex factors on the Egr1 promoter serum response elements.
    Watson DK; Robinson L; Hodge DR; Kola I; Papas TS; Seth A
    Oncogene; 1997 Jan; 14(2):213-21. PubMed ID: 9010223
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Dam it's good! DamID profiling of protein-DNA interactions.
    Aughey GN; Southall TD
    Wiley Interdiscip Rev Dev Biol; 2016; 5(1):25-37. PubMed ID: 26383089
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Activation of the cardiac alpha-actin promoter depends upon serum response factor, Tinman homologue, Nkx-2.5, and intact serum response elements.
    Chen CY; Croissant J; Majesky M; Topouzis S; McQuinn T; Frankovsky MJ; Schwartz RJ
    Dev Genet; 1996; 19(2):119-30. PubMed ID: 8900044
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Detection of in vivo protein-DNA interactions using DamID in mammalian cells.
    Vogel MJ; Peric-Hupkes D; van Steensel B
    Nat Protoc; 2007; 2(6):1467-78. PubMed ID: 17545983
    [TBL] [Abstract][Full Text] [Related]  

  • 19. iDamIDseq and iDEAR: an improved method and computational pipeline to profile chromatin-binding proteins.
    Gutierrez-Triana JA; Mateo JL; Ibberson D; Ryu S; Wittbrodt J
    Development; 2016 Nov; 143(22):4272-4278. PubMed ID: 27707796
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Tbx5 associates with Nkx2-5 and synergistically promotes cardiomyocyte differentiation.
    Hiroi Y; Kudoh S; Monzen K; Ikeda Y; Yazaki Y; Nagai R; Komuro I
    Nat Genet; 2001 Jul; 28(3):276-80. PubMed ID: 11431700
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 4.