67 related articles for article (PubMed ID: 28191853)
1. Hyperplectonemes: A Higher Order Compact and Dynamic DNA Self-Organization.
Japaridze A; Muskhelishvili G; Benedetti F; Gavriilidou AF; Zenobi R; De Los Rios P; Longo G; Dietler G
Nano Lett; 2017 Mar; 17(3):1938-1948. PubMed ID: 28191853
[TBL] [Abstract][Full Text] [Related]
2. An architectural role of the Escherichia coli chromatin protein FIS in organising DNA.
Schneider R; Lurz R; Lüder G; Tolksdorf C; Travers A; Muskhelishvili G
Nucleic Acids Res; 2001 Dec; 29(24):5107-14. PubMed ID: 11812843
[TBL] [Abstract][Full Text] [Related]
3. Base-pair resolution analysis of the effect of supercoiling on DNA flexibility and major groove recognition by triplex-forming oligonucleotides.
Pyne ALB; Noy A; Main KHS; Velasco-Berrelleza V; Piperakis MM; Mitchenall LA; Cugliandolo FM; Beton JG; Stevenson CEM; Hoogenboom BW; Bates AD; Maxwell A; Harris SA
Nat Commun; 2021 Feb; 12(1):1053. PubMed ID: 33594049
[TBL] [Abstract][Full Text] [Related]
4. Spiral structure of Escherichia coli HUalphabeta provides foundation for DNA supercoiling.
Guo F; Adhya S
Proc Natl Acad Sci U S A; 2007 Mar; 104(11):4309-14. PubMed ID: 17360520
[TBL] [Abstract][Full Text] [Related]
5. Bacterial Nucleoid: Interplay of DNA Demixing and Supercoiling.
Joyeux M
Biophys J; 2020 May; 118(9):2141-2150. PubMed ID: 31629479
[TBL] [Abstract][Full Text] [Related]
6. Fast dynamics of supercoiled DNA revealed by single-molecule experiments.
Crut A; Koster DA; Seidel R; Wiggins CH; Dekker NH
Proc Natl Acad Sci U S A; 2007 Jul; 104(29):11957-62. PubMed ID: 17623785
[TBL] [Abstract][Full Text] [Related]
7. DNA sequence encodes the position of DNA supercoils.
Kim SH; Ganji M; Kim E; van der Torre J; Abbondanzieri E; Dekker C
Elife; 2018 Dec; 7():. PubMed ID: 30523779
[TBL] [Abstract][Full Text] [Related]
8. The structural code of cyanobacterial genomes.
Lehmann R; Machné R; Herzel H
Nucleic Acids Res; 2014 Aug; 42(14):8873-83. PubMed ID: 25056315
[TBL] [Abstract][Full Text] [Related]
9. Spatio-temporal organization of the
Royzenblat SK; Freddolino L
EcoSal Plus; 2024 Jun; ():eesp00012022. PubMed ID: 38864557
[No Abstract] [Full Text] [Related]
10. Live to fight another day: The bacterial nucleoid under stress.
Walker AM; Abbondanzieri EA; Meyer AS
Mol Microbiol; 2024 May; ():. PubMed ID: 38690745
[TBL] [Abstract][Full Text] [Related]
11. DNA supercoiling in bacteria: state of play and challenges from a viewpoint of physics based modeling.
Junier I; Ghobadpour E; Espeli O; Everaers R
Front Microbiol; 2023; 14():1192831. PubMed ID: 37965550
[TBL] [Abstract][Full Text] [Related]
12. Biophysics of protein-DNA interactions and chromosome organization.
Marko JF
Physica A; 2015 Jan; 418():126-153. PubMed ID: 25419039
[TBL] [Abstract][Full Text] [Related]
13. Spatial organization of DNA sequences directs the assembly of bacterial chromatin by a nucleoid-associated protein.
Japaridze A; Renevey S; Sobetzko P; Stoliar L; Nasser W; Dietler G; Muskhelishvili G
J Biol Chem; 2017 May; 292(18):7607-7618. PubMed ID: 28316324
[TBL] [Abstract][Full Text] [Related]
14. Defined chromosome structure in the genome-reduced bacterium Mycoplasma pneumoniae.
Trussart M; Yus E; Martinez S; Baù D; Tahara YO; Pengo T; Widjaja M; Kretschmer S; Swoger J; Djordjevic S; Turnbull L; Whitchurch C; Miyata M; Marti-Renom MA; Lluch-Senar M; Serrano L
Nat Commun; 2017 Mar; 8():14665. PubMed ID: 28272414
[TBL] [Abstract][Full Text] [Related]
15. Dynamic action of an intrinsically disordered protein in DNA compaction that induces mycobacterial dormancy.
Nishiyama A; Shimizu M; Narita T; Kodera N; Ozeki Y; Yokoyama A; Mayanagi K; Yamaguchi T; Hakamata M; Shaban AK; Tateishi Y; Ito K; Matsumoto S
Nucleic Acids Res; 2024 Jan; 52(2):816-830. PubMed ID: 38048321
[TBL] [Abstract][Full Text] [Related]
16. Partition complex structure can arise from sliding and bridging of ParB dimers.
Connolley L; Schnabel L; Thanbichler M; Murray SM
Nat Commun; 2023 Jul; 14(1):4567. PubMed ID: 37516778
[TBL] [Abstract][Full Text] [Related]
17. Extracting and characterizing protein-free megabase-pair DNA for
Holub M; Birnie A; Japaridze A; van der Torre J; Ridder MD; de Ram C; Pabst M; Dekker C
Cell Rep Methods; 2022 Dec; 2(12):100366. PubMed ID: 36590691
[TBL] [Abstract][Full Text] [Related]
18. Spatiotemporal Coupling of DNA Supercoiling and Genomic Sequence Organization-A Timing Chain for the Bacterial Growth Cycle?
Muskhelishvili G; Sobetzko P; Travers A
Biomolecules; 2022 Jun; 12(6):. PubMed ID: 35740956
[TBL] [Abstract][Full Text] [Related]
19. Simultaneous orientation and 3D localization microscopy with a Vortex point spread function.
Hulleman CN; Thorsen RØ; Kim E; Dekker C; Stallinga S; Rieger B
Nat Commun; 2021 Oct; 12(1):5934. PubMed ID: 34635658
[TBL] [Abstract][Full Text] [Related]
20. DNA sequence-directed cooperation between nucleoid-associated proteins.
Japaridze A; Yang W; Dekker C; Nasser W; Muskhelishvili G
iScience; 2021 May; 24(5):102408. PubMed ID: 33997690
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
