These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
176 related articles for article (PubMed ID: 28243596)
1. Comparative Study of Elastic Network Model and Protein Contact Network for Protein Complexes: The Hemoglobin Case. Hu G; Di Paola L; Liang Z; Giuliani A Biomed Res Int; 2017; 2017():2483264. PubMed ID: 28243596 [TBL] [Abstract][Full Text] [Related]
2. The topology and dynamics of protein complexes: insights from intra- molecular network theory. Hu G; Zhou J; Yan W; Chen J; Shen B Curr Protein Pept Sci; 2013 Mar; 14(2):121-32. PubMed ID: 23441894 [TBL] [Abstract][Full Text] [Related]
3. Variations in clique and community patterns in protein structures during allosteric communication: investigation of dynamically equilibrated structures of methionyl tRNA synthetase complexes. Ghosh A; Vishveshwara S Biochemistry; 2008 Nov; 47(44):11398-407. PubMed ID: 18842003 [TBL] [Abstract][Full Text] [Related]
4. Protein complex compositions predicted by structural similarity. Davis FP; Braberg H; Shen MY; Pieper U; Sali A; Madhusudhan MS Nucleic Acids Res; 2006; 34(10):2943-52. PubMed ID: 16738133 [TBL] [Abstract][Full Text] [Related]
5. Comparing interfacial dynamics in protein-protein complexes: an elastic network approach. Zen A; Micheletti C; Keskin O; Nussinov R BMC Struct Biol; 2010 Aug; 10():26. PubMed ID: 20691107 [TBL] [Abstract][Full Text] [Related]
6. Integration of network models and evolutionary analysis into high-throughput modeling of protein dynamics and allosteric regulation: theory, tools and applications. Liang Z; Verkhivker GM; Hu G Brief Bioinform; 2020 May; 21(3):815-835. PubMed ID: 30911759 [TBL] [Abstract][Full Text] [Related]
7. Linking structural features of protein complexes and biological function. Sowmya G; Breen EJ; Ranganathan S Protein Sci; 2015 Sep; 24(9):1486-94. PubMed ID: 26131659 [TBL] [Abstract][Full Text] [Related]
8. Oligomerisation status and evolutionary conservation of interfaces of protein structural domain superfamilies. Sukhwal A; Sowdhamini R Mol Biosyst; 2013 Jul; 9(7):1652-61. PubMed ID: 23532342 [TBL] [Abstract][Full Text] [Related]
9. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks. Xu B; Guan J IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(4):616-27. PubMed ID: 26356332 [TBL] [Abstract][Full Text] [Related]
10. Identifying protein complexes using hybrid properties. Chen L; Shi X; Kong X; Zeng Z; Cai YD J Proteome Res; 2009 Nov; 8(11):5212-8. PubMed ID: 19764809 [TBL] [Abstract][Full Text] [Related]
11. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks. Chen B; Fan W; Liu J; Wu FX Brief Bioinform; 2014 Mar; 15(2):177-94. PubMed ID: 23780996 [TBL] [Abstract][Full Text] [Related]
12. A Mixed Protein Structure Network and Elastic Network Model Approach to Predict the Structural Communication in Biomolecular Systems: The PDZ2 Domain from Tyrosine Phosphatase 1E As a Case Study. Raimondi F; Felline A; Seeber M; Mariani S; Fanelli F J Chem Theory Comput; 2013 May; 9(5):2504-18. PubMed ID: 26583738 [TBL] [Abstract][Full Text] [Related]
14. Weak conservation of structural features in the interfaces of homologous transient protein-protein complexes. Sudha G; Singh P; Swapna LS; Srinivasan N Protein Sci; 2015 Nov; 24(11):1856-73. PubMed ID: 26311309 [TBL] [Abstract][Full Text] [Related]
15. Investigating a macromolecular complex: the toolkit of methods. Perrakis A; Musacchio A; Cusack S; Petosa C J Struct Biol; 2011 Aug; 175(2):106-12. PubMed ID: 21620973 [TBL] [Abstract][Full Text] [Related]
16. Discovering protein complexes in dense reliable neighborhoods of protein interaction networks. Li XL; Foo CS; Ng SK Comput Syst Bioinformatics Conf; 2007; 6():157-68. PubMed ID: 17951821 [TBL] [Abstract][Full Text] [Related]
17. Editorial. Liao L; Hu X Methods; 2016 Nov; 110():1-2. PubMed ID: 27836021 [No Abstract] [Full Text] [Related]
18. Toward the mechanism of dynamical couplings and translocation in hepatitis C virus NS3 helicase using elastic network model. Zheng W; Liao JC; Brooks BR; Doniach S Proteins; 2007 Jun; 67(4):886-96. PubMed ID: 17373706 [TBL] [Abstract][Full Text] [Related]
19. Homogeneous decomposition of protein interaction networks: refining the description of intra-modular interactions. Del Mondo G; Eveillard D; Rusu I Bioinformatics; 2009 Apr; 25(7):926-32. PubMed ID: 19223451 [TBL] [Abstract][Full Text] [Related]
20. Hemoglobin, an "evergreen" red protein. Bettati S; Viappiani C; Mozzarelli A Biochim Biophys Acta; 2009 Sep; 1794(9):1317-24. PubMed ID: 19361581 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]