309 related articles for article (PubMed ID: 28278228)
1. BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.
Gorgolewski KJ; Alfaro-Almagro F; Auer T; Bellec P; Capotă M; Chakravarty MM; Churchill NW; Cohen AL; Craddock RC; Devenyi GA; Eklund A; Esteban O; Flandin G; Ghosh SS; Guntupalli JS; Jenkinson M; Keshavan A; Kiar G; Liem F; Raamana PR; Raffelt D; Steele CJ; Quirion PO; Smith RE; Strother SC; Varoquaux G; Wang Y; Yarkoni T; Poldrack RA
PLoS Comput Biol; 2017 Mar; 13(3):e1005209. PubMed ID: 28278228
[TBL] [Abstract][Full Text] [Related]
2. A reproducible and generalizable software workflow for analysis of large-scale neuroimaging data collections using BIDS Apps.
Zhao C; Jarecka D; Covitz S; Chen Y; Eickhoff SB; Fair DA; Franco AR; Halchenko YO; Hendrickson TJ; Hoffstaedter F; Houghton A; Kiar G; Macdonald A; Mehta K; Milham MP; Salo T; Hanke M; Ghosh SS; Cieslak M; Satterthwaite TD
bioRxiv; 2023 Aug; ():. PubMed ID: 37645999
[TBL] [Abstract][Full Text] [Related]
3. BMAT: An open-source BIDS managing and analysis tool.
Vanden Bulcke C; Wynen M; Detobel J; La Rosa F; Absinta M; Dricot L; Macq B; Bach Cuadra M; Maggi P
Neuroimage Clin; 2022; 36():103252. PubMed ID: 36451357
[TBL] [Abstract][Full Text] [Related]
4. Curation of BIDS (CuBIDS): A workflow and software package for streamlining reproducible curation of large BIDS datasets.
Covitz S; Tapera TM; Adebimpe A; Alexander-Bloch AF; Bertolero MA; Feczko E; Franco AR; Gur RE; Gur RC; Hendrickson T; Houghton A; Mehta K; Murtha K; Perrone AJ; Robert-Fitzgerald T; Schabdach JM; Shinohara RT; Vogel JW; Zhao C; Fair DA; Milham MP; Cieslak M; Satterthwaite TD
Neuroimage; 2022 Nov; 263():119609. PubMed ID: 36064140
[TBL] [Abstract][Full Text] [Related]
5. Integrating the BIDS Neuroimaging Data Format and Workflow Optimization for Large-Scale Medical Image Analysis.
Bao S; Boyd BD; Kanakaraj P; Ramadass K; Meyer FAC; Liu Y; Duett WE; Huo Y; Lyu I; Zald DH; Smith SA; Rogers BP; Landman BA
J Digit Imaging; 2022 Dec; 35(6):1576-1589. PubMed ID: 35922700
[TBL] [Abstract][Full Text] [Related]
6. Micapipe: A pipeline for multimodal neuroimaging and connectome analysis.
Cruces RR; Royer J; Herholz P; Larivière S; Vos de Wael R; Paquola C; Benkarim O; Park BY; Degré-Pelletier J; Nelson MC; DeKraker J; Leppert IR; Tardif C; Poline JB; Concha L; Bernhardt BC
Neuroimage; 2022 Nov; 263():119612. PubMed ID: 36070839
[TBL] [Abstract][Full Text] [Related]
7. The clinical value of large neuroimaging data sets in Alzheimer's disease.
Toga AW
Neuroimaging Clin N Am; 2012 Feb; 22(1):107-18, ix. PubMed ID: 22284737
[TBL] [Abstract][Full Text] [Related]
8. BrainSuite BIDS App: Containerized Workflows for MRI Analysis.
Kim Y; Joshi AA; Choi S; Joshi SH; Bhushan C; Varadarajan D; Haldar JP; Leahy RM; Shattuck DW
bioRxiv; 2023 Mar; ():. PubMed ID: 36993283
[TBL] [Abstract][Full Text] [Related]
9. Lin4Neuro: a customized Linux distribution ready for neuroimaging analysis.
Nemoto K; Dan I; Rorden C; Ohnishi T; Tsuzuki D; Okamoto M; Yamashita F; Asada T
BMC Med Imaging; 2011 Jan; 11():3. PubMed ID: 21266047
[TBL] [Abstract][Full Text] [Related]
10. The R package for DICOM to brain imaging data structure conversion.
Wulms N; Eppe S; Dehghan-Nayyeri M; Streeter AJ; Bonberg N; Berger K; Sundermann B; Minnerup H
Sci Data; 2023 Oct; 10(1):673. PubMed ID: 37794076
[TBL] [Abstract][Full Text] [Related]
11. ASL-BIDS, the brain imaging data structure extension for arterial spin labeling.
Clement P; Castellaro M; Okell TW; Thomas DL; Vandemaele P; Elgayar S; Oliver-Taylor A; Kirk T; Woods JG; Vos SB; Kuijer JPA; Achten E; van Osch MJP; ; Detre JA; Lu H; Alsop DC; Chappell MA; Hernandez-Garcia L; Petr J; Mutsaerts HJMM
Sci Data; 2022 Sep; 9(1):543. PubMed ID: 36068231
[TBL] [Abstract][Full Text] [Related]
12. qMRI-BIDS: An extension to the brain imaging data structure for quantitative magnetic resonance imaging data.
Karakuzu A; Appelhoff S; Auer T; Boudreau M; Feingold F; Khan AR; Lazari A; Markiewicz C; Mulder M; Phillips C; Salo T; Stikov N; Whitaker K; de Hollander G
Sci Data; 2022 Aug; 9(1):517. PubMed ID: 36002444
[TBL] [Abstract][Full Text] [Related]
13. The open-source neuroimaging research enterprise.
Marcus DS; Archie KA; Olsen TR; Ramaratnam M
J Digit Imaging; 2007 Nov; 20 Suppl 1(Suppl 1):130-8. PubMed ID: 17710494
[TBL] [Abstract][Full Text] [Related]
14. MindSeer: a portable and extensible tool for visualization of structural and functional neuroimaging data.
Moore EB; Poliakov AV; Lincoln P; Brinkley JF
BMC Bioinformatics; 2007 Oct; 8():389. PubMed ID: 17937818
[TBL] [Abstract][Full Text] [Related]
15. VIEWDEX: A STATUS REPORT.
Svalkvist A; Svensson S; Håkansson M; Båth M; Månsson LG
Radiat Prot Dosimetry; 2016 Jun; 169(1-4):38-45. PubMed ID: 26822421
[TBL] [Abstract][Full Text] [Related]
16. Simple and efficient method for region of interest value extraction from picture archiving and communication system viewer with optical character recognition software and macro program.
Lee YH; Park EH; Suh JS
Acad Radiol; 2015 Jan; 22(1):113-6. PubMed ID: 25127847
[TBL] [Abstract][Full Text] [Related]
17. A Comprehensive Framework to Capture the Arcana of Neuroimaging Analysis.
Close TG; Ward PGD; Sforazzini F; Goscinski W; Chen Z; Egan GF
Neuroinformatics; 2020 Jan; 18(1):109-129. PubMed ID: 31236848
[TBL] [Abstract][Full Text] [Related]
18. Informatics in Radiology: GUIBOLD: a graphical user interface for image reconstruction and data analysis in susceptibility-weighted MR imaging.
Deistung A; Rauscher A; Sedlacik J; Witoszynskyj S; Reichenbach JR
Radiographics; 2008; 28(3):639-51. PubMed ID: 18480476
[TBL] [Abstract][Full Text] [Related]
19. FlywheelTools: Data Curation and Manipulation on the Flywheel Platform.
Tapera TM; Cieslak M; Bertolero M; Adebimpe A; Aguirre GK; Butler ER; Cook PA; Davila D; Elliott MA; Linguiti S; Murtha K; Tackett W; Detre JA; Satterthwaite TD
Front Neuroinform; 2021; 15():678403. PubMed ID: 34239433
[TBL] [Abstract][Full Text] [Related]
20. The RUMBA software: tools for neuroimaging data analysis.
Bly BM; Rebbechi D; Hanson SJ; Grasso G
Neuroinformatics; 2004; 2(1):71-100. PubMed ID: 15067169
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
