BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

132 related articles for article (PubMed ID: 28285392)

  • 1. A Consensus Method for Ancestral Recombination Graphs.
    Kuhner MK; Yamato J
    J Mol Evol; 2017 Mar; 84(2-3):129-138. PubMed ID: 28285392
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Assessing Differences Between Ancestral Recombination Graphs.
    Kuhner MK; Yamato J
    J Mol Evol; 2015 Jun; 80(5-6):258-64. PubMed ID: 25841763
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The era of the ARG: An introduction to ancestral recombination graphs and their significance in empirical evolutionary genomics.
    Lewanski AL; Grundler MC; Bradburd GS
    PLoS Genet; 2024 Jan; 20(1):e1011110. PubMed ID: 38236805
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Association mapping of complex diseases with ancestral recombination graphs: models and efficient algorithms.
    Wu Y
    J Comput Biol; 2008 Sep; 15(7):667-84. PubMed ID: 18651799
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Building Ancestral Recombination Graphs for Whole Genomes.
    Nguyen TT; Le VS; Ho HB; Si Le Q
    IEEE/ACM Trans Comput Biol Bioinform; 2017; 14(2):478-483. PubMed ID: 26992176
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Mapping trait loci by use of inferred ancestral recombination graphs.
    Minichiello MJ; Durbin R
    Am J Hum Genet; 2006 Nov; 79(5):910-22. PubMed ID: 17033967
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A Resolution of the Static Formulation Question for the Problem of Computing the History Bound.
    Matsieva J; Kelk S; Scornavacca C; Whidden C; Gusfield D
    IEEE/ACM Trans Comput Biol Bioinform; 2017; 14(2):404-417. PubMed ID: 26887004
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Accurate detection of recombinant breakpoints in whole-genome alignments.
    Westesson O; Holmes I
    PLoS Comput Biol; 2009 Mar; 5(3):e1000318. PubMed ID: 19300487
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Constructing minimal ancestral recombination graphs.
    Song YS; Hein J
    J Comput Biol; 2005 Mar; 12(2):147-69. PubMed ID: 15767774
    [TBL] [Abstract][Full Text] [Related]  

  • 10. From Summary Statistics to Gene Trees: Methods for Inferring Positive Selection.
    Hejase HA; Dukler N; Siepel A
    Trends Genet; 2020 Apr; 36(4):243-258. PubMed ID: 31954511
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Efficient Inference of Recent and Ancestral Recombination within Bacterial Populations.
    Mostowy R; Croucher NJ; Andam CP; Corander J; Hanage WP; Marttinen P
    Mol Biol Evol; 2017 May; 34(5):1167-1182. PubMed ID: 28199698
    [TBL] [Abstract][Full Text] [Related]  

  • 12. GARD: a genetic algorithm for recombination detection.
    Kosakovsky Pond SL; Posada D; Gravenor MB; Woelk CH; Frost SD
    Bioinformatics; 2006 Dec; 22(24):3096-8. PubMed ID: 17110367
    [TBL] [Abstract][Full Text] [Related]  

  • 13. [Rearrangement and inference of chromosome structures].
    Gorbunov KY; Gershgorin RA; Lyubetsky VA
    Mol Biol (Mosk); 2015; 49(3):372-83. PubMed ID: 26107890
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Computing the joint distribution of tree shape and tree distance for gene tree inference and recombination detection.
    Chung Y; Perna NT; Ané C
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(5):1263-74. PubMed ID: 24384712
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Breakpoint medians and breakpoint phylogenies: a fixed-parameter approach.
    Gramm J; Niedermeier R
    Bioinformatics; 2002; 18 Suppl 2():S128-39. PubMed ID: 12385994
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Dual multiple change-point model leads to more accurate recombination detection.
    Minin VN; Dorman KS; Fang F; Suchard MA
    Bioinformatics; 2005 Jul; 21(13):3034-42. PubMed ID: 15914546
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Colored de Bruijn graphs and the genome halving problem.
    Alekseyev MA; Pevzner PA
    IEEE/ACM Trans Comput Biol Bioinform; 2007; 4(1):98-107. PubMed ID: 17277417
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The distribution of waiting distances in ancestral recombination graphs.
    Deng Y; Song YS; Nielsen R
    Theor Popul Biol; 2021 Oct; 141():34-43. PubMed ID: 34186053
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Espalier: Efficient Tree Reconciliation and Ancestral Recombination Graphs Reconstruction Using Maximum Agreement Forests.
    Rasmussen DA; Guo F
    Syst Biol; 2023 Nov; 72(5):1154-1170. PubMed ID: 37458753
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Improved Algorithmic Complexity for the 3SEQ Recombination Detection Algorithm.
    Lam HM; Ratmann O; Boni MF
    Mol Biol Evol; 2018 Jan; 35(1):247-251. PubMed ID: 29029186
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.