These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

334 related articles for article (PubMed ID: 28290677)

  • 1. Molecular Insights into the Translesion Synthesis of Benzyl-Guanine from Molecular Dynamics Simulations: Structural Evidence of Mutagenic and Nonmutagenic Replication.
    Wilson KA; Wetmore SD
    Biochemistry; 2017 Apr; 56(13):1841-1853. PubMed ID: 28290677
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Conformational Flexibility of the Benzyl-Guanine Adduct in a Bypass Polymerase Active Site Permits Replication: Insights from Molecular Dynamics Simulations.
    Wilson KA; Wetmore SD
    Chem Res Toxicol; 2017 Nov; 30(11):2013-2022. PubMed ID: 28810119
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Mutagenic nucleotide incorporation and hindered translocation by a food carcinogen C8-dG adduct in Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): modeling and dynamics studies.
    Zhang L; Rechkoblit O; Wang L; Patel DJ; Shapiro R; Broyde S
    Nucleic Acids Res; 2006; 34(11):3326-37. PubMed ID: 16820532
    [TBL] [Abstract][Full Text] [Related]  

  • 4. How Y-Family DNA polymerase IV is more accurate than Dpo4 at dCTP insertion opposite an N2-dG adduct of benzo[a]pyrene.
    Sholder G; Creech A; Loechler EL
    DNA Repair (Amst); 2015 Nov; 35():144-53. PubMed ID: 26523515
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Toward understanding the mutagenicity of an environmental carcinogen: structural insights into nucleotide incorporation preferences.
    Perlow RA; Broyde S
    J Mol Biol; 2002 Sep; 322(2):291-309. PubMed ID: 12217692
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Y-Family DNA polymerases may use two different dNTP shapes for insertion: a hypothesis and its implications.
    Chandani S; Loechler EL
    J Mol Graph Model; 2009 Apr; 27(7):759-69. PubMed ID: 19188081
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A new anti conformation for N-(deoxyguanosin-8-yl)-2-acetylaminofluorene (AAF-dG) allows Watson-Crick pairing in the Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4).
    Wang L; Broyde S
    Nucleic Acids Res; 2006; 34(3):785-95. PubMed ID: 16452300
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Effects of base sequence context on translesion synthesis past a bulky (+)-trans-anti-B[a]P-N2-dG lesion catalyzed by the Y-family polymerase pol kappa.
    Huang X; Kolbanovskiy A; Wu X; Zhang Y; Wang Z; Zhuang P; Amin S; Geacintov NE
    Biochemistry; 2003 Mar; 42(8):2456-66. PubMed ID: 12600213
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The DinB•RecA complex of Escherichia coli mediates an efficient and high-fidelity response to ubiquitous alkylation lesions.
    Cafarelli TM; Rands TJ; Godoy VG
    Environ Mol Mutagen; 2014 Mar; 55(2):92-102. PubMed ID: 24243543
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Structural basis for proficient incorporation of dTTP opposite O6-methylguanine by human DNA polymerase iota.
    Pence MG; Choi JY; Egli M; Guengerich FP
    J Biol Chem; 2010 Dec; 285(52):40666-72. PubMed ID: 20961860
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Evading the proofreading machinery of a replicative DNA polymerase: induction of a mutation by an environmental carcinogen.
    Perlow RA; Broyde S
    J Mol Biol; 2001 Jun; 309(2):519-36. PubMed ID: 11371169
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Molecular modeling benzo[a]pyrene N2-dG adducts in the two overlapping active sites of the Y-family DNA polymerase Dpo4.
    Chandani S; Loechler EL
    J Mol Graph Model; 2007 Jan; 25(5):658-70. PubMed ID: 16782374
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Bypass of aflatoxin B1 adducts by the Sulfolobus solfataricus DNA polymerase IV.
    Banerjee S; Brown KL; Egli M; Stone MP
    J Am Chem Soc; 2011 Aug; 133(32):12556-68. PubMed ID: 21790157
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Base sequence dependence of in vitro translesional DNA replication past a bulky lesion catalyzed by the exo- Klenow fragment of Pol I.
    Zhuang P; Kolbanovskiy A; Amin S; Geacintov NE
    Biochemistry; 2001 Jun; 40(22):6660-9. PubMed ID: 11380261
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Klenow fragment-DNA interaction required for the incorporation of nucleotides opposite guanine and O6-methylguanine.
    Spratt TE
    Biochemistry; 1997 Oct; 36(43):13292-7. PubMed ID: 9341220
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Poleta, Polzeta and Rev1 together are required for G to T transversion mutations induced by the (+)- and (-)-trans-anti-BPDE-N2-dG DNA adducts in yeast cells.
    Zhao B; Wang J; Geacintov NE; Wang Z
    Nucleic Acids Res; 2006; 34(2):417-25. PubMed ID: 16415180
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Influence of local sequence context on damaged base conformation in human DNA polymerase iota: molecular dynamics studies of nucleotide incorporation opposite a benzo[a]pyrene-derived adenine lesion.
    Donny-Clark K; Broyde S
    Nucleic Acids Res; 2009 Nov; 37(21):7095-109. PubMed ID: 19767609
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Insights into the effect of minor groove interactions and metal cofactors on mutagenic replication by human DNA polymerase β.
    Koag MC; Lee S
    Biochem J; 2018 Feb; 475(3):571-585. PubMed ID: 29301983
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Kinetic analysis of translesion synthesis opposite bulky N2- and O6-alkylguanine DNA adducts by human DNA polymerase REV1.
    Choi JY; Guengerich FP
    J Biol Chem; 2008 Aug; 283(35):23645-55. PubMed ID: 18591245
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Replication of the Aristolochic Acid I Adenine Adduct (ALI-N
    Kathuria P; Singh P; Sharma P; Wetmore SD
    Chem Res Toxicol; 2020 Oct; 33(10):2573-2583. PubMed ID: 32975111
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.