These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

379 related articles for article (PubMed ID: 28296259)

  • 1. Taxonomy-free molecular diatom index for high-throughput eDNA biomonitoring.
    Apothéloz-Perret-Gentil L; Cordonier A; Straub F; Iseli J; Esling P; Pawlowski J
    Mol Ecol Resour; 2017 Nov; 17(6):1231-1242. PubMed ID: 28296259
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Monitoring the ecological status of rivers with diatom eDNA metabarcoding: A comparison of taxonomic markers and analytical approaches for the inference of a molecular diatom index.
    Apothéloz-Perret-Gentil L; Bouchez A; Cordier T; Cordonier A; Guéguen J; Rimet F; Vasselon V; Pawlowski J
    Mol Ecol; 2021 Jul; 30(13):2959-2968. PubMed ID: 32979002
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Boosting DNA metabarcoding for biomonitoring with phylogenetic estimation of operational taxonomic units' ecological profiles.
    Keck F; Vasselon V; Rimet F; Bouchez A; Kahlert M
    Mol Ecol Resour; 2018 Nov; 18(6):1299-1309. PubMed ID: 29923321
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comparison of environmental DNA and bulk-sample metabarcoding using highly degenerate cytochrome c oxidase I primers.
    Macher JN; Vivancos A; Piggott JJ; Centeno FC; Matthaei CD; Leese F
    Mol Ecol Resour; 2018 Nov; 18(6):1456-1468. PubMed ID: 30129704
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Metabarcoding vs. morphological identification to assess diatom diversity in environmental studies.
    Zimmermann J; Glöckner G; Jahn R; Enke N; Gemeinholzer B
    Mol Ecol Resour; 2015 May; 15(3):526-42. PubMed ID: 25270047
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Supervised machine learning outperforms taxonomy-based environmental DNA metabarcoding applied to biomonitoring.
    Cordier T; Forster D; Dufresne Y; Martins CIM; Stoeck T; Pawlowski J
    Mol Ecol Resour; 2018 Nov; 18(6):1381-1391. PubMed ID: 30014577
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Diatom DNA metabarcoding for ecological assessment: Comparison among bioinformatics pipelines used in six European countries reveals the need for standardization.
    Bailet B; Apothéloz-Perret-Gentil L; Baričević A; Chonova T; Franc A; Frigerio JM; Kelly M; Mora D; Pfannkuchen M; Proft S; Ramon M; Vasselon V; Zimmermann J; Kahlert M
    Sci Total Environ; 2020 Nov; 745():140948. PubMed ID: 32736102
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Freshwater diatom biomonitoring through benthic kick-net metabarcoding.
    Maitland VC; Robinson CV; Porter TM; Hajibabaei M
    PLoS One; 2020; 15(11):e0242143. PubMed ID: 33206700
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Genetic barcoding of Ecuadorian epilithic diatom species suitable as water quality bioindicators.
    Ballesteros I; Castillejo P; Haro AP; Montes CC; Heinrich C; Lobo EA
    C R Biol; 2020 Jun; 343(1):41-52. PubMed ID: 32720487
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Supervised machine learning improves general applicability of eDNA metabarcoding for reservoir health monitoring.
    Hu H; Wei XY; Liu L; Wang YB; Jia HJ; Bu LK; Pei DS
    Water Res; 2023 Nov; 246():120686. PubMed ID: 37812979
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Environmental Monitoring: Inferring the Diatom Index from Next-Generation Sequencing Data.
    Visco JA; Apothéloz-Perret-Gentil L; Cordonier A; Esling P; Pillet L; Pawlowski J
    Environ Sci Technol; 2015 Jul; 49(13):7597-605. PubMed ID: 26052741
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Diatom eDNA metabarcoding and morphological methods for bioassessment of karstic river.
    Kulaš A; Gligora Udovič M; Tapolczai K; Žutinić P; Orlić S; Levkov Z
    Sci Total Environ; 2022 Jul; 829():154536. PubMed ID: 35304150
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A taxonomy-free diatom eDNA-based technique for assessing lake trophic level using lake sediments.
    Gregersen R; Pearman JK; Atalah J; Waters S; Vandergoes MJ; Howarth JD; Thomson-Laing G; Thompson L; Wood SA
    J Environ Manage; 2023 Nov; 345():118885. PubMed ID: 37659373
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Environmental DNA metabarcoding studies are critically affected by substrate selection.
    Koziol A; Stat M; Simpson T; Jarman S; DiBattista JD; Harvey ES; Marnane M; McDonald J; Bunce M
    Mol Ecol Resour; 2019 Mar; 19(2):366-376. PubMed ID: 30485662
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Predicting the Ecological Quality Status of Marine Environments from eDNA Metabarcoding Data Using Supervised Machine Learning.
    Cordier T; Esling P; Lejzerowicz F; Visco J; Ouadahi A; Martins C; Cedhagen T; Pawlowski J
    Environ Sci Technol; 2017 Aug; 51(16):9118-9126. PubMed ID: 28665601
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Environmental DNA metabarcoding: Transforming how we survey animal and plant communities.
    Deiner K; Bik HM; Mächler E; Seymour M; Lacoursière-Roussel A; Altermatt F; Creer S; Bista I; Lodge DM; de Vere N; Pfrender ME; Bernatchez L
    Mol Ecol; 2017 Nov; 26(21):5872-5895. PubMed ID: 28921802
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Multi-marker eDNA metabarcoding survey to assess the environmental impact of three offshore gas platforms in the North Adriatic Sea (Italy).
    Cordier T; Frontalini F; Cermakova K; Apothéloz-Perret-Gentil L; Treglia M; Scantamburlo E; Bonamin V; Pawlowski J
    Mar Environ Res; 2019 Apr; 146():24-34. PubMed ID: 30890270
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Decision-making and best practices for taxonomy-free environmental DNA metabarcoding in biomonitoring using Hill numbers.
    Mächler E; Walser JC; Altermatt F
    Mol Ecol; 2021 Jul; 30(13):3326-3339. PubMed ID: 33188644
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Development and implementation of eco-genomic tools for aquatic ecosystem biomonitoring: the SYNAQUA French-Swiss program.
    Lefrançois E; Apothéloz-Perret-Gentil L; Blancher P; Botreau S; Chardon C; Crepin L; Cordier T; Cordonier A; Domaizon I; Ferrari BJD; Guéguen J; Hustache JC; Jacas L; Jacquet S; Lacroix S; Mazenq AL; Pawlowska A; Perney P; Pawlowski J; Rimet F; Rubin JF; Trevisan D; Vivien R; Bouchez A
    Environ Sci Pollut Res Int; 2018 Dec; 25(34):33858-33866. PubMed ID: 29732510
    [TBL] [Abstract][Full Text] [Related]  

  • 20. [Spatial and Temporal Heterogeneity and Ecological Health Evaluation of Diatom Community Based on eDNA].
    Jiang S; Zhang Y; Li FL; Zhang XW
    Huan Jing Ke Xue; 2023 Jan; 44(1):272-281. PubMed ID: 36635815
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 19.