177 related articles for article (PubMed ID: 28330138)
21. SUGAR: graphical user interface-based data refiner for high-throughput DNA sequencing.
Sato Y; Kojima K; Nariai N; Yamaguchi-Kabata Y; Kawai Y; Takahashi M; Mimori T; Nagasaki M
BMC Genomics; 2014 Aug; 15(1):664. PubMed ID: 25103311
[TBL] [Abstract][Full Text] [Related]
22. BIGpre: a quality assessment package for next-generation sequencing data.
Zhang T; Luo Y; Liu K; Pan L; Zhang B; Yu J; Hu S
Genomics Proteomics Bioinformatics; 2011 Dec; 9(6):238-44. PubMed ID: 22289480
[TBL] [Abstract][Full Text] [Related]
23. FamAnn: an automated variant annotation pipeline to facilitate target discovery for family-based sequencing studies.
Yao J; Zhang KX; Kramer M; Pellegrini M; McCombie WR
Bioinformatics; 2014 Apr; 30(8):1175-1176. PubMed ID: 24395755
[TBL] [Abstract][Full Text] [Related]
24. Fully automated pipeline for detection of sex linked genes using RNA-Seq data.
Michalovova M; Kubat Z; Hobza R; Vyskot B; Kejnovsky E
BMC Bioinformatics; 2015 Mar; 16(1):78. PubMed ID: 25884927
[TBL] [Abstract][Full Text] [Related]
25. ToTem: a tool for variant calling pipeline optimization.
Tom N; Tom O; Malcikova J; Pavlova S; Kubesova B; Rausch T; Kolarik M; Benes V; Bystry V; Pospisilova S
BMC Bioinformatics; 2018 Jun; 19(1):243. PubMed ID: 29940847
[TBL] [Abstract][Full Text] [Related]
26. ReSeqTools: an integrated toolkit for large-scale next-generation sequencing based resequencing analysis.
He W; Zhao S; Liu X; Dong S; Lv J; Liu D; Wang J; Meng Z
Genet Mol Res; 2013 Dec; 12(4):6275-83. PubMed ID: 24338423
[TBL] [Abstract][Full Text] [Related]
27. CoverView: a sequence quality evaluation tool for next generation sequencing data.
Münz M; Mahamdallie S; Yost S; Rimmer A; Poyastro-Pearson E; Strydom A; Seal S; Ruark E; Rahman N
Wellcome Open Res; 2018; 3():36. PubMed ID: 29881786
[TBL] [Abstract][Full Text] [Related]
28. Gencore: an efficient tool to generate consensus reads for error suppressing and duplicate removing of NGS data.
Chen S; Zhou Y; Chen Y; Huang T; Liao W; Xu Y; Li Z; Gu J
BMC Bioinformatics; 2019 Dec; 20(Suppl 23):606. PubMed ID: 31881822
[TBL] [Abstract][Full Text] [Related]
29. GUItars: a GUI tool for analysis of high-throughput RNA interference screening data.
Goktug AN; Ong SS; Chen T
PLoS One; 2012; 7(11):e49386. PubMed ID: 23185323
[TBL] [Abstract][Full Text] [Related]
30. CANGS DB: a stand-alone web-based database tool for processing, managing and analyzing 454 data in biodiversity studies.
Pandey RV; Nolte V; Boenigk J; Schlötterer C
BMC Res Notes; 2011 Jun; 4():227. PubMed ID: 21718534
[TBL] [Abstract][Full Text] [Related]
31. BacSeq: A User-Friendly Automated Pipeline for Whole-Genome Sequence Analysis of Bacterial Genomes.
Chukamnerd A; Jeenkeawpiam K; Chusri S; Pomwised R; Singkhamanan K; Surachat K
Microorganisms; 2023 Jul; 11(7):. PubMed ID: 37512941
[TBL] [Abstract][Full Text] [Related]
32. CoVaCS: a consensus variant calling system.
Chiara M; Gioiosa S; Chillemi G; D'Antonio M; Flati T; Picardi E; Zambelli F; Horner DS; Pesole G; Castrignanò T
BMC Genomics; 2018 Feb; 19(1):120. PubMed ID: 29402227
[TBL] [Abstract][Full Text] [Related]
33. INDELseek: detection of complex insertions and deletions from next-generation sequencing data.
Au CH; Leung AY; Kwong A; Chan TL; Ma ES
BMC Genomics; 2017 Jan; 18(1):16. PubMed ID: 28056804
[TBL] [Abstract][Full Text] [Related]
34. [Automatic analysis pipeline of next-generation sequencing data].
Wenke L; Fengyu L; Siyao Z; Bin C; Na Z; Yu N; Dao Z; Qian Z
Yi Chuan; 2014 Jun; 36(6):618-24. PubMed ID: 24929521
[TBL] [Abstract][Full Text] [Related]
35. SeqMule: automated pipeline for analysis of human exome/genome sequencing data.
Guo Y; Ding X; Shen Y; Lyon GJ; Wang K
Sci Rep; 2015 Sep; 5():14283. PubMed ID: 26381817
[TBL] [Abstract][Full Text] [Related]
36. Identifying cancer mutation targets across thousands of samples: MuteProc, a high throughput mutation analysis pipeline.
Hadj Khodabakhshi A; Fejes AP; Birol I; Jones SJ
BMC Bioinformatics; 2013 May; 14():167. PubMed ID: 23714400
[TBL] [Abstract][Full Text] [Related]
37. MagicViewer: integrated solution for next-generation sequencing data visualization and genetic variation detection and annotation.
Hou H; Zhao F; Zhou L; Zhu E; Teng H; Li X; Bao Q; Wu J; Sun Z
Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W732-6. PubMed ID: 20444865
[TBL] [Abstract][Full Text] [Related]
38. CANGS: a user-friendly utility for processing and analyzing 454 GS-FLX data in biodiversity studies.
Pandey RV; Nolte V; Schlötterer C
BMC Res Notes; 2010 Jan; 3():3. PubMed ID: 20180949
[TBL] [Abstract][Full Text] [Related]
39. Vanno: a visualization-aided variant annotation tool.
Huang PJ; Lee CC; Tan BC; Yeh YM; Huang KY; Gan RC; Chen TW; Lee CY; Yang ST; Liao CS; Liu H; Tang P
Hum Mutat; 2015 Feb; 36(2):167-74. PubMed ID: 25196204
[TBL] [Abstract][Full Text] [Related]
40. GAMES identifies and annotates mutations in next-generation sequencing projects.
Sana ME; Iascone M; Marchetti D; Palatini J; Galasso M; Volinia S
Bioinformatics; 2011 Jan; 27(1):9-13. PubMed ID: 20971986
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
