These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
23. FCMM: A comparative metagenomic approach for functional characterization of multiple metagenome samples. Lee J; Lee HT; Hong WY; Jang E; Kim J J Microbiol Methods; 2015 Aug; 115():121-8. PubMed ID: 26027543 [TBL] [Abstract][Full Text] [Related]
24. Soda pans of the Pannonian steppe harbor unique bacterial communities adapted to multiple extreme conditions. Szabó A; Korponai K; Kerepesi C; Somogyi B; Vörös L; Bartha D; Márialigeti K; Felföldi T Extremophiles; 2017 May; 21(3):639-649. PubMed ID: 28389755 [TBL] [Abstract][Full Text] [Related]
25. Metagenome and Metatranscriptome Profiling of Moderate and Severe COPD Sputum in Taiwanese Han Males. Lee SW; Kuan CS; Wu LS; Weng JT PLoS One; 2016; 11(7):e0159066. PubMed ID: 27428540 [TBL] [Abstract][Full Text] [Related]
26. Filtration and Normalization of Sequencing Read Data in Whole-Metagenome Shotgun Samples. Chouvarine P; Wiehlmann L; Moran Losada P; DeLuca DS; Tümmler B PLoS One; 2016; 11(10):e0165015. PubMed ID: 27760173 [TBL] [Abstract][Full Text] [Related]
27. Sputum DNA sequencing in cystic fibrosis: non-invasive access to the lung microbiome and to pathogen details. Feigelman R; Kahlert CR; Baty F; Rassouli F; Kleiner RL; Kohler P; Brutsche MH; von Mering C Microbiome; 2017 Feb; 5(1):20. PubMed ID: 28187782 [TBL] [Abstract][Full Text] [Related]
28. Deciphering the human microbiome using next-generation sequencing data and bioinformatics approaches. Kim Y; Koh I; Rho M Methods; 2015 Jun; 79-80():52-9. PubMed ID: 25448477 [TBL] [Abstract][Full Text] [Related]
29. metaBIT, an integrative and automated metagenomic pipeline for analysing microbial profiles from high-throughput sequencing shotgun data. Louvel G; Der Sarkissian C; Hanghøj K; Orlando L Mol Ecol Resour; 2016 Nov; 16(6):1415-1427. PubMed ID: 27238636 [TBL] [Abstract][Full Text] [Related]
30. Fast and simple protein-alignment-guided assembly of orthologous gene families from microbiome sequencing reads. Huson DH; Tappu R; Bazinet AL; Xie C; Cummings MP; Nieselt K; Williams R Microbiome; 2017 Jan; 5(1):11. PubMed ID: 28122610 [TBL] [Abstract][Full Text] [Related]
31. Bacteria and Archaea diversity within the hot springs of Lake Magadi and Little Magadi in Kenya. Kambura AK; Mwirichia RK; Kasili RW; Karanja EN; Makonde HM; Boga HI BMC Microbiol; 2016 Jul; 16(1):136. PubMed ID: 27388368 [TBL] [Abstract][Full Text] [Related]
32. Comparative Metagenomic Analysis Reveals Mechanisms for Stress Response in Hypoliths from Extreme Hyperarid Deserts. Le PT; Makhalanyane TP; Guerrero LD; Vikram S; Van de Peer Y; Cowan DA Genome Biol Evol; 2016 Sep; 8(9):2737-47. PubMed ID: 27503299 [TBL] [Abstract][Full Text] [Related]
33. Application of metagenomics in the human gut microbiome. Wang WL; Xu SY; Ren ZG; Tao L; Jiang JW; Zheng SS World J Gastroenterol; 2015 Jan; 21(3):803-14. PubMed ID: 25624713 [TBL] [Abstract][Full Text] [Related]
34. Shotgun microbial profiling of fossil remains. Der Sarkissian C; Ermini L; Jónsson H; Alekseev AN; Crubezy E; Shapiro B; Orlando L Mol Ecol; 2014 Apr; 23(7):1780-98. PubMed ID: 24612293 [TBL] [Abstract][Full Text] [Related]
35. A fast and robust protocol for metataxonomic analysis using RNAseq data. Cox JW; Ballweg RA; Taft DH; Velayutham P; Haslam DB; Porollo A Microbiome; 2017 Jan; 5(1):7. PubMed ID: 28103917 [TBL] [Abstract][Full Text] [Related]
36. Metagenomics and Single-Cell Omics Data Analysis for Human Microbiome Research. Han M; Yang P; Zhou H; Li H; Ning K Adv Exp Med Biol; 2016; 939():117-137. PubMed ID: 27807746 [TBL] [Abstract][Full Text] [Related]
37. From bacterial to microbial ecosystems (metagenomics). Williamson SJ; Yooseph S Methods Mol Biol; 2012; 804():35-55. PubMed ID: 22144147 [TBL] [Abstract][Full Text] [Related]
38. Diversity of extremophilic bacteria in the sediment of high-altitude lakes located in the mountain desert of Ojos del Salado volcano, Dry-Andes. Aszalós JM; Krett G; Anda D; Márialigeti K; Nagy B; Borsodi AK Extremophiles; 2016 Sep; 20(5):603-20. PubMed ID: 27315168 [TBL] [Abstract][Full Text] [Related]
39. Methods for extracting 'omes from microbialites. Gómez-Acata ES; Centeno CM; Falcón LI J Microbiol Methods; 2019 May; 160():1-10. PubMed ID: 30877015 [TBL] [Abstract][Full Text] [Related]