These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

157 related articles for article (PubMed ID: 28340552)

  • 1. StrAuto: automation and parallelization of STRUCTURE analysis.
    Chhatre VE; Emerson KJ
    BMC Bioinformatics; 2017 Mar; 18(1):192. PubMed ID: 28340552
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Structure_threader: An improved method for automation and parallelization of programs structure, fastStructure and MavericK on multicore CPU systems.
    Pina-Martins F; Silva DN; Fino J; Paulo OS
    Mol Ecol Resour; 2017 Nov; 17(6):e268-e274. PubMed ID: 28776963
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Towards a HPC-oriented parallel implementation of a learning algorithm for bioinformatics applications.
    D'Angelo G; Rampone S
    BMC Bioinformatics; 2014; 15 Suppl 5(Suppl 5):S2. PubMed ID: 25077818
    [TBL] [Abstract][Full Text] [Related]  

  • 4. PyBDA: a command line tool for automated analysis of big biological data sets.
    Dirmeier S; Emmenlauer M; Dehio C; Beerenwinkel N
    BMC Bioinformatics; 2019 Nov; 20(1):564. PubMed ID: 31718539
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Asterias: integrated analysis of expression and aCGH data using an open-source, web-based, parallelized software suite.
    Díaz-Uriarte R; Alibés A; Morrissey ER; Cañada A; Rueda OM; Neves ML
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W75-80. PubMed ID: 17488846
    [TBL] [Abstract][Full Text] [Related]  

  • 6. StructRNAfinder: an automated pipeline and web server for RNA families prediction.
    Arias-Carrasco R; Vásquez-Morán Y; Nakaya HI; Maracaja-Coutinho V
    BMC Bioinformatics; 2018 Feb; 19(1):55. PubMed ID: 29454313
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PAR: a PARallel and distributed job crusher.
    Berenger F; Coti C; Zhang KY
    Bioinformatics; 2010 Nov; 26(22):2918-9. PubMed ID: 20870644
    [TBL] [Abstract][Full Text] [Related]  

  • 8. ADMIXPIPE: population analyses in ADMIXTURE for non-model organisms.
    Mussmann SM; Douglas MR; Chafin TK; Douglas ME
    BMC Bioinformatics; 2020 Jul; 21(1):337. PubMed ID: 32727359
    [TBL] [Abstract][Full Text] [Related]  

  • 9. GNU MCSim: Bayesian statistical inference for SBML-coded systems biology models.
    Bois FY
    Bioinformatics; 2009 Jun; 25(11):1453-4. PubMed ID: 19304877
    [TBL] [Abstract][Full Text] [Related]  

  • 10. clubber: removing the bioinformatics bottleneck in big data analyses.
    Miller M; Zhu C; Bromberg Y
    J Integr Bioinform; 2017 Jun; 14(2):. PubMed ID: 28609295
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MultiPhyl: a high-throughput phylogenomics webserver using distributed computing.
    Keane TM; Naughton TJ; McInerney JO
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W33-7. PubMed ID: 17553837
    [TBL] [Abstract][Full Text] [Related]  

  • 12. New TNT routines for parallel computing with MPI.
    Morales ME; Goloboff PA
    Mol Phylogenet Evol; 2023 Jan; 178():107643. PubMed ID: 36216302
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SeqMule: automated pipeline for analysis of human exome/genome sequencing data.
    Guo Y; Ding X; Shen Y; Lyon GJ; Wang K
    Sci Rep; 2015 Sep; 5():14283. PubMed ID: 26381817
    [TBL] [Abstract][Full Text] [Related]  

  • 14. JMS: An Open Source Workflow Management System and Web-Based Cluster Front-End for High Performance Computing.
    Brown DK; Penkler DL; Musyoka TM; Bishop ÖT
    PLoS One; 2015; 10(8):e0134273. PubMed ID: 26280450
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Speeding up ecological and evolutionary computations in R; essentials of high performance computing for biologists.
    Visser MD; McMahon SM; Merow C; Dixon PM; Record S; Jongejans E
    PLoS Comput Biol; 2015 Mar; 11(3):e1004140. PubMed ID: 25811842
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Dynamo: a flexible, user-friendly development tool for subtomogram averaging of cryo-EM data in high-performance computing environments.
    Castaño-Díez D; Kudryashev M; Arheit M; Stahlberg H
    J Struct Biol; 2012 May; 178(2):139-51. PubMed ID: 22245546
    [TBL] [Abstract][Full Text] [Related]  

  • 17. birgHPC: creating instant computing clusters for bioinformatics and molecular dynamics.
    Chew TH; Joyce-Tan KH; Akma F; Shamsir MS
    Bioinformatics; 2011 May; 27(9):1320-1. PubMed ID: 21398666
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Jflow: a workflow management system for web applications.
    Mariette J; Escudié F; Bardou P; Nabihoudine I; Noirot C; Trotard MS; Gaspin C; Klopp C
    Bioinformatics; 2016 Feb; 32(3):456-8. PubMed ID: 26454273
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Vivaldi: A Domain-Specific Language for Volume Processing and Visualization on Distributed Heterogeneous Systems.
    Choi H; Choi W; Quan TM; Hildebrand DG; Pfister H; Jeong WK
    IEEE Trans Vis Comput Graph; 2014 Dec; 20(12):2407-16. PubMed ID: 26356955
    [TBL] [Abstract][Full Text] [Related]  

  • 20. ParallelStructure: a R package to distribute parallel runs of the population genetics program STRUCTURE on multi-core computers.
    Besnier F; Glover KA
    PLoS One; 2013; 8(7):e70651. PubMed ID: 23923012
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.